RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 SOX7Q9BT81 388 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 ZNF331Q9NQX6 463 aaPredicted RBP17.03■□□□□ 0.32
SMPD3-201ENST00000219334 CDC14BO60729 498 aa17.02■□□□□ 0.32
SMPD3-201ENST00000219334 CYC1P08574 325 aa17.02■□□□□ 0.32
SMPD3-201ENST00000219334 CD276Q5ZPR3 534 aa17.02■□□□□ 0.32
SMPD3-201ENST00000219334 TIGD3Q6B0B8 471 aa17.02■□□□□ 0.32
SMPD3-201ENST00000219334 GNPNAT1Q96EK6 184 aaPredicted RBP17.02■□□□□ 0.32
SMPD3-201ENST00000219334 TNFRSF12AQ9NP84 129 aa17.02■□□□□ 0.32
SMPD3-201ENST00000219334 MMP25Q9NPA2 562 aa17.02■□□□□ 0.32
SMPD3-201ENST00000219334 HPP00738 406 aa17.02■□□□□ 0.31
SMPD3-201ENST00000219334 METTL15P1P0C7V9 234 aa17.02■□□□□ 0.31
SMPD3-201ENST00000219334 BTG1P62324 171 aa17.02■□□□□ 0.31
SMPD3-201ENST00000219334 PRDX4Q13162 271 aa17.02■□□□□ 0.31
SMPD3-201ENST00000219334 MTCH2Q9Y6C9 303 aa17.02■□□□□ 0.31
SMPD3-201ENST00000219334 STUMQ69YW2 141 aa17.02■□□□□ 0.31
SMPD3-201ENST00000219334 OR2T2Q6IF00 324 aa17.02■□□□□ 0.31
SMPD3-201ENST00000219334 ZNF793Q6ZN11 406 aa17.02■□□□□ 0.31
SMPD3-201ENST00000219334 CCL17Q92583 94 aa17.02■□□□□ 0.31
SMPD3-201ENST00000219334 SPSB1Q96BD6 273 aa17.02■□□□□ 0.31
SMPD3-201ENST00000219334 ARHGDIGQ99819 225 aa17.02■□□□□ 0.31
SMPD3-201ENST00000219334 SCN9AQ15858 1988 aa17.02■□□□□ 0.31
SMPD3-201ENST00000219334 NHSL1Q5SYE7 1610 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 KCNE1BA0A087WTH5 132 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 SOX8P57073 446 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 FAM58AQ8N1B3 248 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 ARHGEF39Q8N4T4 335 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 PXT1Q8NFP0 134 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 OR2Y1Q8NGV0 311 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 OR4C3Q8NH37 302 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 FBXW5Q969U6 566 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 RPEQ96AT9 228 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 TCTN1Q2MV58 587 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 OR10K2Q6IF99 312 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 RAB19A4D1S5 217 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 OR7C2O60412 319 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 CD3EP07766 207 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 CELA2BP08218 269 aaPredicted RBP17.01■□□□□ 0.31
SMPD3-201ENST00000219334 M6PRP20645 277 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 RAB5CP51148 216 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 FUT7Q11130 342 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 LINC01555Q8NAE3 123 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 OR2T6Q8NHC8 308 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 PRR7Q8TB68 274 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 LOXHD1Q8IVV2 1947 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 SSSCA1O60232 199 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 DGCR2P98153 550 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 OTOSQ8NHW6 89 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 TCFL5Q9UL49 500 aa17.01■□□□□ 0.31
SMPD3-201ENST00000219334 A0A1B0GTQ1 180 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 ACOT6Q3I5F7 207 aaPredicted RBP17■□□□□ 0.31
SMPD3-201ENST00000219334 ADPRHL1Q8NDY3 354 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 TCEAL7Q9BRU2 100 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 A0A0B4J2E0 115 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 A0A1B0GX12 115 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 CLPPQ16740 277 aaPredicted RBP17■□□□□ 0.31
SMPD3-201ENST00000219334 RND1Q92730 232 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 RAB1CQ92928 201 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 TAAR5O14804 337 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 GPX5O75715 221 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 FUT3P21217 361 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 KLF3P57682 345 aaPredicted RBP17■□□□□ 0.31
SMPD3-201ENST00000219334 ALG14Q96F25 216 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 POM121L2Q96KW2 1035 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 OR8B4Q96RC9 309 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 IAPPP10997 89 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 ZBTB25P24278 435 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 NDUFA6P56556 154 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 TLE1Q04724 770 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 TMEM182Q6ZP80 229 aaPredicted RBP17■□□□□ 0.31
SMPD3-201ENST00000219334 CELF2-AS1Q8N7Q2 184 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 DDOQ99489 341 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 SLC26A1Q9H2B4 701 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 RNF24Q9Y225 148 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 CSAG2Q9Y5P2 127 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 SERPINE3A8MV23 424 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 C21orf140B9A014 251 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 C5orf67F2Z3F1 127 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 LYZL6O75951 148 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 TNFAIP6P98066 277 aaPredicted RBP17■□□□□ 0.31
SMPD3-201ENST00000219334 APH1BQ8WW43 257 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 EXTL1Q92935 676 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 ACTR3CQ9C0K3 210 aaPredicted RBP17■□□□□ 0.31
SMPD3-201ENST00000219334 OCIAD1Q9NX40 245 aa17■□□□□ 0.31
SMPD3-201ENST00000219334 SPAARA0A1B0GVQ0 90 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 ANGPTL7O43827 346 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 GOSR1O95249 250 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 SCGB1D1O95968 90 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 TAGLN2P37802 199 aaKnown RBP16.99■□□□□ 0.31
SMPD3-201ENST00000219334 ABI3BPQ7Z7G0 1075 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 SMRP1Q8NCR6 262 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 M1APQ8TC57 530 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 LRP12Q9Y561 859 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 LRP3O75074 770 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 JTBO76095 146 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 CD82P27701 267 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 HRH1P35367 487 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 PRSS41Q7RTY9 318 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 SPNS2Q8IVW8 549 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 XKRY2A2RUG3 117 aa16.99■□□□□ 0.31
SMPD3-201ENST00000219334 SFTPCP11686 197 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms