RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 CARD17Q5XLA6 110 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 BAP18Q8IXM2 172 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 PUSL1Q8N0Z8 303 aaKnown RBP15.28■□□□□ 0.04
USB1-201ENST00000219281 ZSCAN4Q8NAM6 433 aaPredicted RBP15.28■□□□□ 0.04
USB1-201ENST00000219281 OR5T2Q8NGG2 359 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 OR2AJ1Q8NGZ0 328 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 WNT2BQ93097 391 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 TMEM230Q96A57 120 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 ZNF501Q96CX3 271 aaPredicted RBP15.28■□□□□ 0.04
USB1-201ENST00000219281 FAM71F1Q96KD3 344 aaPredicted RBP15.28■□□□□ 0.04
USB1-201ENST00000219281 CDX2Q99626 313 aaPredicted RBP15.28■□□□□ 0.04
USB1-201ENST00000219281 SLC22A11Q9NSA0 550 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 FGF21Q9NSA1 209 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 HPF1Q9NWY4 346 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 GPR132Q9UNW8 380 aa15.28■□□□□ 0.04
USB1-201ENST00000219281 DUX1O43812 170 aa15.27■□□□□ 0.04
USB1-201ENST00000219281 RAD51DO75771 328 aa15.27■□□□□ 0.04
USB1-201ENST00000219281 HIST1H1DP16402 221 aaKnown RBP15.27■□□□□ 0.04
USB1-201ENST00000219281 SUMO3P55854 103 aaPredicted RBP15.27■□□□□ 0.04
USB1-201ENST00000219281 TMEM50BP56557 158 aa15.27■□□□□ 0.04
USB1-201ENST00000219281 CYCSP99999 105 aaKnown RBP15.27■□□□□ 0.04
USB1-201ENST00000219281 AIMP2Q13155 320 aaKnown RBP15.27■□□□□ 0.04
USB1-201ENST00000219281 SHBQ15464 509 aa15.27■□□□□ 0.04
USB1-201ENST00000219281 GUCA2BQ16661 112 aa15.27■□□□□ 0.04
USB1-201ENST00000219281 CCDC157Q569K6 752 aa15.27■□□□□ 0.04
USB1-201ENST00000219281 TMEM71Q6P5X7 295 aa15.27■□□□□ 0.04
USB1-201ENST00000219281 OR8B12Q8NGG6 310 aa15.27■□□□□ 0.04
USB1-201ENST00000219281 STT3BQ8TCJ2 826 aa15.27■□□□□ 0.04
USB1-201ENST00000219281 C1orf147Q96MC9 270 aaPredicted RBP15.27■□□□□ 0.04
USB1-201ENST00000219281 CYTL1Q9NRR1 136 aa15.27■□□□□ 0.04
USB1-201ENST00000219281 KLRF1Q9NZS2 232 aa15.27■□□□□ 0.04
USB1-201ENST00000219281 ZNF319Q9P2F9 582 aa15.27■□□□□ 0.04
USB1-201ENST00000219281 COLQQ9Y215 455 aaPredicted RBP15.27■□□□□ 0.04
USB1-201ENST00000219281 TRBV6-7A0A0A0MS04 114 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 ZNF878C9JN71 531 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 NDUFA2O43678 99 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 ACTL6AO96019 429 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 HCKP08631 526 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 GSTP1P09211 210 aaKnown RBP15.27■□□□□ 0.03
USB1-201ENST00000219281 GLB1P16278 677 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 ZNF121P58317 390 aaPredicted RBP15.27■□□□□ 0.03
USB1-201ENST00000219281 SRSF3P84103 164 aaKnown RBP15.27■□□□□ 0.03
USB1-201ENST00000219281 SGCAQ16586 387 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 GFOD2Q3B7J2 385 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 DMRTC1Q5HYR2 192 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 NKAPLQ5M9Q1 402 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 TMEM88Q6PEY1 159 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 CLEC18BQ6UXF7 455 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 Q7L0L9 218 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 NAA40Q86UY6 237 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 UEVLDQ8IX04 471 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 BHLHE23Q8NDY6 225 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 SLC30A7Q8NEW0 376 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 OR10Z1Q8NGY1 313 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 KCNG3Q8TAE7 436 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 TMED6Q8WW62 240 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 ADAT1Q9BUB4 502 aaKnown RBP15.27■□□□□ 0.03
USB1-201ENST00000219281 GPR84Q9NQS5 396 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 SRPK3Q9UPE1 567 aa15.27■□□□□ 0.03
USB1-201ENST00000219281 A0A1W2PNV4 684 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 SIGLEC6O43699 453 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 SFT2D2O95562 160 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 CD79AP11912 226 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 VAX1Q5SQQ9 334 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 ANKRD37Q7Z713 158 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 LDLRAD3Q86YD5 345 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 SVBPQ8N300 66 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 TMEM59Q9BXS4 323 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 SLC7A5P2Q9GIP4 190 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 SEMA5BQ9P283 1151 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 ANAPC10Q9UM13 185 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 FLVCR1Q9Y5Y0 555 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 DMDP11532 3685 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 CRTAPO75718 401 aaPredicted RBP15.26■□□□□ 0.03
USB1-201ENST00000219281 ZNF41P51814 821 aaPredicted RBP15.26■□□□□ 0.03
USB1-201ENST00000219281 PLEKHN1Q494U1 663 aaPredicted RBP15.26■□□□□ 0.03
USB1-201ENST00000219281 NFAM1Q8NET5 270 aaPredicted RBP15.26■□□□□ 0.03
USB1-201ENST00000219281 NOXO1Q8NFA2 376 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 RNF141Q8WVD5 230 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 ARHGAP5-AS1Q96IT6 56 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 GPER1Q99527 375 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 SAV1Q9H4B6 383 aaPredicted RBP15.26■□□□□ 0.03
USB1-201ENST00000219281 MOB1AQ9H8S9 216 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 FANCFQ9NPI8 374 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 TMEM100Q9NV29 134 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 PPP4R1LQ9P1A2 415 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 ASH2LQ9UBL3 628 aa15.26■□□□□ 0.03
USB1-201ENST00000219281 MSGN1A6NI15 193 aa15.25■□□□□ 0.03
USB1-201ENST00000219281 RER1O15258 196 aa15.25■□□□□ 0.03
USB1-201ENST00000219281 PGA4P0DJD7 388 aa15.25■□□□□ 0.03
USB1-201ENST00000219281 PGA3P0DJD8 388 aa15.25■□□□□ 0.03
USB1-201ENST00000219281 GABREP78334 506 aa15.25■□□□□ 0.03
USB1-201ENST00000219281 NAAAQ02083 359 aa15.25■□□□□ 0.03
USB1-201ENST00000219281 FAM219AQ8IW50 185 aa15.25■□□□□ 0.03
USB1-201ENST00000219281 CARFQ8N187 725 aa15.25■□□□□ 0.03
USB1-201ENST00000219281 ARRDC1Q8N5I2 433 aa15.25■□□□□ 0.03
USB1-201ENST00000219281 POC1BQ8TC44 478 aa15.25■□□□□ 0.03
USB1-201ENST00000219281 ARL11Q969Q4 196 aa15.25■□□□□ 0.03
USB1-201ENST00000219281 OR5AC2Q9NZP5 309 aa15.25■□□□□ 0.03
USB1-201ENST00000219281 ZNF629Q9UEG4 869 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms