RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 ALX3O95076 343 aa13.3□□□□□ -0.28
SPTLC2-201ENST00000216484 TCTN1Q2MV58 587 aa13.3□□□□□ -0.28
SPTLC2-201ENST00000216484 SIRT6Q8N6T7 355 aa13.3□□□□□ -0.28
SPTLC2-201ENST00000216484 RLN3Q8WXF3 142 aa13.3□□□□□ -0.28
SPTLC2-201ENST00000216484 WBP2Q969T9 261 aa13.3□□□□□ -0.28
SPTLC2-201ENST00000216484 FZD6O60353 706 aa13.3□□□□□ -0.28
SPTLC2-201ENST00000216484 TEAD1P28347 426 aa13.3□□□□□ -0.28
SPTLC2-201ENST00000216484 HAAOP46952 286 aa13.3□□□□□ -0.28
SPTLC2-201ENST00000216484 IL10RAQ13651 578 aa13.3□□□□□ -0.28
SPTLC2-201ENST00000216484 SOWAHCQ53LP3 525 aaPredicted RBP13.3□□□□□ -0.28
SPTLC2-201ENST00000216484 TBC1D26Q86UD7 250 aa13.3□□□□□ -0.28
SPTLC2-201ENST00000216484 OR51E1Q8TCB6 317 aa13.3□□□□□ -0.28
SPTLC2-201ENST00000216484 MRAP2Q96G30 205 aa13.3□□□□□ -0.28
SPTLC2-201ENST00000216484 OR2T8A6NH00 312 aa13.3□□□□□ -0.28
SPTLC2-201ENST00000216484 CEBPBP17676 345 aa13.3□□□□□ -0.28
SPTLC2-201ENST00000216484 TTC9BQ8N6N2 239 aa13.3□□□□□ -0.28
SPTLC2-201ENST00000216484 ZNF519Q8TB69 540 aa13.3□□□□□ -0.28
SPTLC2-201ENST00000216484 FAHD2AQ96GK7 314 aa13.3□□□□□ -0.28
SPTLC2-201ENST00000216484 IL21Q9HBE4 155 aa13.3□□□□□ -0.28
SPTLC2-201ENST00000216484 CSN3P07498 182 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 CMTM4Q8IZR5 234 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 SLC26A10Q8NG04 563 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 SLC25A22Q9H936 323 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 RCL1Q9Y2P8 373 aaKnown RBP13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 RGS13O14921 159 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 SEMA7AO75326 666 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 CST7O76096 145 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 PRLHRP49683 370 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 TRILQ7L0X0 811 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 OR1B1Q8NGR6 318 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 KCNK15Q9H427 330 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 KLF7O75840 302 aaPredicted RBP13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 EMP1P54849 157 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 HLXQ14774 488 aaPredicted RBP13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 SHHQ15465 462 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 YRDCQ86U90 279 aaKnown RBP13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 C5orf17Q8NAS9 161 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 OR8A1Q8NGG7 326 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 NXPE3Q969Y0 559 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 SEBOXQ9HB31 216 aaPredicted RBP13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 TRGV10A0A0A0MS01 117 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 A0A1B0GWA3 101 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 AP4M1O00189 453 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 OPN1MWP04001 364 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 OPN1MW2P0DN77 364 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 OPN1MW3P0DN78 364 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 LRRC10Q5BKY1 277 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 MYOZ3Q8TDC0 251 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 IL23AQ9NPF7 189 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 USP3Q9Y6I4 520 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 MELTFP08582 738 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 OR4E1P0C645 316 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 EXT1Q16394 746 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 AMMECR1LQ6DCA0 310 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 ZNF343Q6P1L6 599 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 ZDHHC23Q8IYP9 409 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 LRRC15Q8TF66 581 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 ATP5SQ99766 215 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 DEFB127Q9H1M4 99 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 C20orf141Q9NUB4 165 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 CLN3Q13286 438 aa13.29□□□□□ -0.28
SPTLC2-201ENST00000216484 MGPP08493 103 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 AOAHP28039 575 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 NPY5RQ15761 445 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 LBHQ53QV2 105 aaPredicted RBP13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 PHYHIPQ92561 330 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 PRR14Q9BWN1 585 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 GPR84Q9NQS5 396 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 DHCR7Q9UBM7 475 aaKnown RBP13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 J3KRW8 73 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 XRCC2O43543 280 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 MT-ATP6P00846 226 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 MMP11P24347 488 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 KCNJ3P48549 501 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 NTHL1P78549 312 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 IHHQ14623 411 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 C1orf140Q5VVS0 124 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 EDARADDQ8WWZ3 215 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 SOX21Q9Y651 276 aaPredicted RBP13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 AUP1Q9Y679 476 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 ZC3H12DA2A288 527 aaKnown RBP13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 GNG10P50151 68 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 ZNF77Q15935 545 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 MDGA1Q8NFP4 955 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 UBQLN3Q9H347 655 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 NDRG4Q9ULP0 352 aaKnown RBP13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 CEP290O15078 2479 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 IGHV3-15A0A0B4J1V0 119 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 SFTPA2Q8IWL1 248 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 SFTPA1Q8IWL2 248 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 ZFPM2Q8WW38 1151 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 HSD17B10Q99714 261 aaKnown RBP13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 PHIPQ8WWQ0 1821 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 NRG2O14511 850 aaPredicted RBP13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 ALDOCP09972 364 aaKnown RBP13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 TCTAP57738 103 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 SMIM21Q3B7S5 101 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 PIANPQ8IYJ0 282 aa13.28□□□□□ -0.28
SPTLC2-201ENST00000216484 ARFGAP1Q8N6T3 406 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms