RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 TCTE3Q8IZS6 198 aa17.14■□□□□ 0.33
TNFRSF1A-201ENST00000162749 TOMM5Q8N4H5 51 aa17.14■□□□□ 0.33
TNFRSF1A-201ENST00000162749 Q8NA96 180 aa17.14■□□□□ 0.33
TNFRSF1A-201ENST00000162749 OR14K1Q8NGZ2 314 aa17.14■□□□□ 0.33
TNFRSF1A-201ENST00000162749 NOX3Q9HBY0 568 aa17.14■□□□□ 0.33
TNFRSF1A-201ENST00000162749 MEGF11A6BM72 1044 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 SLC17A2O00624 439 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 CTDSPLO15194 276 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 GSTZ1O43708 216 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 KIR2DL2P43627 348 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 BTG1P62324 171 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 CNEP1R1Q8N9A8 125 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 OR5D14Q8NGL3 314 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 OR1K1Q8NGR3 316 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 C17orf50Q8WW18 174 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 ATPIF1Q9UII2 106 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 PCNX1Q96RV3 2341 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 ZNF20P17024 532 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 RRAS2P62070 204 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 CXADRP78310 365 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 MRPS15P82914 257 aaKnown RBP17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 HIKESHIQ53FT3 197 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 GLT8D1Q68CQ7 371 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 ZNF324BQ6AW86 544 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 OR2A2Q6IF42 318 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 ANKRD16Q6P6B7 361 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 LYPD6Q86Y78 171 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 NKAIN3Q8N8D7 197 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 OR13C9Q8NGT0 318 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 OR10A2Q9H208 303 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 AUNIPQ9H7T9 357 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 PLEKHA1Q9HB21 404 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 PLSCR3Q9NRY6 295 aa17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 CGGBP1Q9UFW8 167 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1A-201ENST00000162749 LOC390937A0A1W2PQ73 354 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 DHRS3O75911 302 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 FAM87AP0C7U9 286 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 FOXF2Q12947 444 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 KRTCAP3Q53RY4 240 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 GLYATL3Q5SZD4 288 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 VWA1Q6PCB0 445 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 BAIAP2L2Q6UXY1 529 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 SEM1Q6ZVN7 128 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 SLC7A5P1Q8MH63 180 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 OR1M1Q8NGA1 313 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 SMIM4Q8WVI0 70 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 SGK3Q96BR1 496 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 MCUBQ9NWR8 336 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 ETV7Q9Y603 341 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 LCATP04180 440 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 CD79AP11912 226 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 BDKRB2P30411 391 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 SCAND1P57086 179 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 RAB1AP62820 205 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 CDK10Q15131 360 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 Q6ZSR3 168 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 OR51D1Q8NGF3 324 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 OR2AE1Q8NHA4 323 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 BCL2L2Q92843 193 aaPredicted RBP17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 TMEM138Q9NPI0 162 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 NBEAQ8NFP9 2946 aa17.12■□□□□ 0.33
TNFRSF1A-201ENST00000162749 LOC100509620A0A075B734 347 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 A0A0A6YYJ9 748 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 MBD3L4A6NDZ8 208 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 MBD3L3A6NE82 208 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 MBD3L5A6NJ08 208 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 TPOP07202 933 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 RAB3AP20336 220 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 KLF9Q13886 244 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 RTL6Q6ICC9 239 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 JAGN1Q8N5M9 183 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 OR6K3Q8NGY3 331 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 MBD3L2Q8NHZ7 208 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 GCDHQ92947 438 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 SLC25A28Q96A46 364 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 NUDT15Q9NV35 164 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 V9GYS6 101 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 ITPR1Q14643 2758 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 TPRP12270 2363 aaKnown RBP17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 TRAV6A0A075B6T7 132 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 FAM172BPA6NC97 362 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 TCRBP04435 133 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 IGHV1-2P23083 117 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 HTR2CP28335 458 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 ARR3P36575 388 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 ID4P47928 161 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 RAB11BQ15907 218 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 Q5BKY6 102 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 Q6ZT83 130 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 OR52N4Q8NGI2 321 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 SYNPRQ8TBG9 265 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 FAM3DQ96BQ1 224 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 DPAGT1Q9H3H5 408 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 B3GNT2Q9NY97 397 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 FAM215AQ9Y5M1 114 aa17.11■□□□□ 0.33
TNFRSF1A-201ENST00000162749 SULT1B1O43704 296 aa17.1■□□□□ 0.33
TNFRSF1A-201ENST00000162749 TNFSF13O75888 250 aa17.1■□□□□ 0.33
TNFRSF1A-201ENST00000162749 SLC34A2O95436 690 aa17.1■□□□□ 0.33
TNFRSF1A-201ENST00000162749 GABRA1P14867 456 aa17.1■□□□□ 0.33
TNFRSF1A-201ENST00000162749 GIFP27352 417 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms