RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 CLEC3BP05452 202 aa16.92■□□□□ 0.3
MBD3-201ENST00000156825 OR4E1P0C645 316 aa16.92■□□□□ 0.3
MBD3-201ENST00000156825 PTBP1P26599 531 aaKnown RBP eCLIP16.92■□□□□ 0.34e-8■■□□□ 13.5
MBD3-201ENST00000156825 IL3RAP26951 378 aa16.92■□□□□ 0.3
MBD3-201ENST00000156825 B3GNTL1Q67FW5 361 aaPredicted RBP16.92■□□□□ 0.3
MBD3-201ENST00000156825 SPRY3O43610 288 aa16.92■□□□□ 0.3
MBD3-201ENST00000156825 ZNF354AO60765 605 aaPredicted RBP16.92■□□□□ 0.3
MBD3-201ENST00000156825 EPHA8P29322 1005 aaPredicted RBP16.92■□□□□ 0.3
MBD3-201ENST00000156825 TIAL1Q01085 375 aaKnown RBP eCLIP16.92■□□□□ 0.3
MBD3-201ENST00000156825 WDR38Q5JTN6 314 aa16.92■□□□□ 0.3
MBD3-201ENST00000156825 C1QL3Q5VWW1 255 aa16.92■□□□□ 0.3
MBD3-201ENST00000156825 CREB3L2Q70SY1 520 aa16.92■□□□□ 0.3
MBD3-201ENST00000156825 ANKRD37Q7Z713 158 aa16.92■□□□□ 0.3
MBD3-201ENST00000156825 C1orf210Q8IVY1 113 aa16.92■□□□□ 0.3
MBD3-201ENST00000156825 FBXL14Q8N1E6 418 aa16.92■□□□□ 0.3
MBD3-201ENST00000156825 PELI1Q96FA3 418 aa16.92■□□□□ 0.3
MBD3-201ENST00000156825 LRP3O75074 770 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 ZFPL1O95159 310 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 PDGFAP04085 211 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 TOMM34Q15785 309 aaPredicted RBP16.91■□□□□ 0.3
MBD3-201ENST00000156825 CMBLQ96DG6 245 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 SIRT3Q9NTG7 399 aaPredicted RBP16.91■□□□□ 0.3
MBD3-201ENST00000156825 GNG13Q9P2W3 67 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 KCNIP4Q6PIL6 250 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 RBPMSQ93062 196 aaKnown RBP16.91■□□□□ 0.3
MBD3-201ENST00000156825 FBXW5Q969U6 566 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 NIPSNAP3BQ9BS92 247 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 A0A087WZY1 265 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 CXorf51AA0A1B0GTR3 108 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 CCL4P13236 92 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 HLA-DOBP13765 273 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 SPNP16150 400 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 ATF1P18846 271 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 ECI1P42126 302 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 TIMD4Q96H15 378 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 HRKO00198 91 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 C1QBP02746 253 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 SELEP16581 610 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 CDKN2AP42771 156 aaKnown RBP16.91■□□□□ 0.3
MBD3-201ENST00000156825 PIGPP57054 158 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 GABRG3Q99928 467 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 SRRQ9GZT4 340 aa16.91■□□□□ 0.3
MBD3-201ENST00000156825 HSBP1L1C9JCN9 74 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 SPINT1O43278 529 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 CATSPERDQ86XM0 798 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 TMEM123Q8N131 208 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 GSX2Q9BZM3 304 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 FBXO4Q9UKT5 387 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 TEX51A0A1B0GUA7 166 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 LALBAP00709 142 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 LINC00303Q3SY05 128 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 GFRALQ6UXV0 394 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 ST8SIA4Q92187 359 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 CRISPLD2Q9H0B8 497 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 ADAMTSL1Q8N6G6 1762 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 POLR2AP24928 1970 aaKnown RBP16.9■□□□□ 0.3
MBD3-201ENST00000156825 KRBOX1C9JBD0 128 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 CDK5Q00535 292 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 HAGHQ16775 308 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 FAM74A1Q5RGS3 127 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 MARC2Q969Z3 335 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 PATE3B3GLJ2 98 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 GIPP09681 153 aaPredicted RBP16.9■□□□□ 0.3
MBD3-201ENST00000156825 CT45A6P0DMU7 189 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 CT45A5P0DMU8 189 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 CT45A7P0DMV0 189 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 CT45A8P0DMV1 189 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 CT45A9P0DMV2 189 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 TAGLN2P37802 199 aaKnown RBP16.9■□□□□ 0.3
MBD3-201ENST00000156825 CT45A2Q5DJT8 189 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 CT45A1Q5HYN5 189 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 OSR2Q8N2R0 312 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 CT45A3Q8NHU0 189 aa16.9■□□□□ 0.3
MBD3-201ENST00000156825 ALG1L2C9J202 215 aa16.89■□□□□ 0.3
MBD3-201ENST00000156825 ACKR3P25106 362 aa16.89■□□□□ 0.3
MBD3-201ENST00000156825 PSMB6P28072 239 aa16.89■□□□□ 0.3
MBD3-201ENST00000156825 SUMO3P55854 103 aaPredicted RBP16.89■□□□□ 0.3
MBD3-201ENST00000156825 ETFDHQ16134 617 aa16.89■□□□□ 0.3
MBD3-201ENST00000156825 OR2T2Q6IF00 324 aa16.89■□□□□ 0.3
MBD3-201ENST00000156825 RTN4IP1Q8WWV3 396 aaPredicted RBP16.89■□□□□ 0.3
MBD3-201ENST00000156825 NARFLQ9H6Q4 476 aa16.89■□□□□ 0.3
MBD3-201ENST00000156825 OCIAD1Q9NX40 245 aa16.89■□□□□ 0.3
MBD3-201ENST00000156825 ZNF724A8MTY0 619 aa16.89■□□□□ 0.29
MBD3-201ENST00000156825 RPS16P62249 146 aaKnown RBP16.89■□□□□ 0.29
MBD3-201ENST00000156825 ZNF766Q5HY98 468 aa16.89■□□□□ 0.29
MBD3-201ENST00000156825 EP300Q09472 2414 aaPredicted RBP16.89■□□□□ 0.29
MBD3-201ENST00000156825 TGM6O95932 706 aa16.89■□□□□ 0.29
MBD3-201ENST00000156825 LIMS3P0CW19 117 aa16.89■□□□□ 0.29
MBD3-201ENST00000156825 LIMS4P0CW20 117 aa16.89■□□□□ 0.29
MBD3-201ENST00000156825 SP6Q3SY56 376 aa16.89■□□□□ 0.29
MBD3-201ENST00000156825 XAF1Q6GPH4 301 aa16.89■□□□□ 0.29
MBD3-201ENST00000156825 MFSD4AQ8N468 514 aa16.89■□□□□ 0.29
MBD3-201ENST00000156825 OR1F12Q8NHA8 337 aa16.89■□□□□ 0.29
MBD3-201ENST00000156825 SCARB1Q8WTV0 552 aa16.89■□□□□ 0.29
MBD3-201ENST00000156825 ZNF230Q9UIE0 474 aaPredicted RBP16.89■□□□□ 0.29
MBD3-201ENST00000156825 OSGIN2Q9Y236 505 aa16.89■□□□□ 0.29
MBD3-201ENST00000156825 OIP5O43482 229 aa16.89■□□□□ 0.29
MBD3-201ENST00000156825 HLA-HP01893 362 aa16.89■□□□□ 0.29
MBD3-201ENST00000156825 CTXN2P0C2S0 81 aa16.89■□□□□ 0.29
MBD3-201ENST00000156825 OR10J4P0C629 311 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms