RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Eddm3bQ8K0E4 149 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Abhd6Q8R2Y0 336 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Olfr1100Q8VFM1 321 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Emc3Q99KI3 261 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Txndc17Q9CQM5 123 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Trp53tg5Q9D976 238 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Ssr3Q9DCF9 185 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Arfgap1Q9EPJ9 414 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Serinc3Q9QZI9 472 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 NbeaQ9EPN1 2936 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Ighv6-6A0A075B5T3 119 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 A0A1Y7VIT9 351 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Vmn1r121K7N6J4 314 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Ogg1O08760 345 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Psmb1O09061 240 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Galr2O88854 371 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Camk2aP11798 478 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Lsm6P62313 80 aaKnown RBP18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 SgcbP82349 320 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Serpine2Q07235 397 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Eif4e1bQ3UTA9 244 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Sqstm1Q64337 442 aaKnown RBP18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Olfr301Q7TS04 311 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Olfr768Q8VGC4 312 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Cryzl1Q921W4 348 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Steap4Q923B6 470 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Ddb2Q99J79 432 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Cdc42ep3Q9CQC5 254 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Desi1Q9CQT7 168 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Dmac2Q9D7K5 258 aaKnown RBP18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Eif3kQ9DBZ5 218 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Dazap2Q9DCP9 168 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 NgfrQ9Z0W1 417 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Gm19410A0A140LJC7 2098 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 NbasE9Q411 2356 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Skint4A7TZF3 474 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Gsg1lD3Z7H4 322 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Vmn2r48E9Q5D8 855 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Zfp616J3QN14 987 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Gm10428J3QNV7 132 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Gm2035J3QP87 144 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Cfl1P18760 166 aaKnown RBP18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Thbs3Q05895 956 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Milr1Q3TB92 246 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 NrrosQ8BMT4 693 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 NraddQ8CJ26 228 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 PhyhipQ8K0S0 330 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Vmn1r183Q8K3N5 305 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Slc22a22Q8R0S9 554 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Rnf167Q91XF4 347 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Mrgpra6Q91ZC6 301 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Uqcrc1Q9CZ13 480 aaKnown RBP18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Tmem178aQ9CZ16 297 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Ap3s1Q9DCR2 193 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 SpastQ9QYY8 614 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Cldn13Q9Z0S4 211 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Ptprz1B9EKR1 2312 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 RelnQ60841 3461 aa18.68■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Sec16aA2AIX1 2377 aa18.67■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Slc25a53A2AF28 346 aa18.67■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 2010315B03RikJ3QK55 433 aa18.67■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 S1pr1O08530 382 aa18.67■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Fcn2O70497 314 aa18.67■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 EdnraQ61614 427 aa18.67■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Iqcf4Q6P8Y2 204 aa18.67■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Scgb1c1Q7M742 95 aa18.67■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 SergefQ80YD6 464 aa18.67■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Chrnb4Q8R493 495 aa18.67■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Olfr994Q8VF73 314 aa18.67■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Cavin3Q91VJ2 260 aa18.67■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Mrm2Q9CPY0 246 aa18.67■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Lrrc18Q9CQ07 262 aa18.67■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 TpbpbQ9CQC0 121 aa18.67■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Mrpl21Q9D1N9 209 aaKnown RBP18.67■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 GrinaQ9ESF4 345 aa18.67■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Lpar2Q9JL06 348 aa18.67■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Plekhb1Q9QYE9 243 aa18.67■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Slc7a11Q9WTR6 502 aa18.67■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Olfr785A0A0N4SVC3 312 aa18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Gm35060A0A140LIV7 231 aa18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Gm28710A0A1B0GR31 962 aa18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Obp2bA2BHR0 176 aa18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Slco5a1E9PVD9 850 aa18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Mknk1O08605 427 aa18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Cd46O88174 365 aa18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 XylbQ3TNA1 551 aa18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Vezf1Q5SXC4 518 aa18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Klk1b21Q61759 261 aa18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Olfr1140Q7TR39 311 aa18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Olfr107Q7TRK4 309 aa18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 YbeyQ8CAV0 164 aa18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 UmodQ91X17 642 aa18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Rnps1Q99M28 305 aaKnown RBP18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Q9D4W2 315 aa18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Jam3Q9D8B7 310 aa18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Tex33Q9D9J2 266 aa18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Srsf10Q9R0U0 262 aaKnown RBP18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Zfhx3Q61329 3726 aa18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Olfr1314A2AVL6 312 aa18.66■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Mfsd4b4J3QNS5 503 aa18.66■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 44.7 ms