RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Muc13P19467 573 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 KitlgP20826 273 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Tie1Q06806 1134 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Olfr18Q0VAX9 331 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Plpp5Q3UMZ3 260 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Krt33bQ61897 404 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Zc4h2Q68FG0 224 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Fpr-rs7Q71MR7 338 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Olfr1058Q7TR74 316 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Olfr487Q7TRU9 314 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Oxa1lQ8BGA9 433 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Ldlrad4Q8BWJ4 306 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Slc35f4Q8BZK4 485 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Nhlrc2Q8BZW8 725 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 QprtQ91X91 299 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 MtfmtQ9D799 386 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Tex29Q9DA77 186 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Cmtm2aQ9DAR1 169 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Ndrg2Q9QYG0 371 aaKnown RBP11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Plek2Q9WV52 353 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Eif3gQ9Z1D1 320 aaKnown RBP11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Lrp4Q8VI56 1905 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Gm13723A0A1L1SUP2 315 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Col9a3A2ACT7 680 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Tex13aA2AFS9 377 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Dpy19l1A6X919 746 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Vmn2r107E9PZJ7 861 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Vmn2r16E9Q025 850 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 GzmmO08643 264 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Sp100O35892 482 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 H2-Ab1P01921 265 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Il5P04401 133 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 P06344 263 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Ctla4P09793 223 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Ly6dP35459 127 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Tmprss9P69525 1065 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Rnft2Q3UF64 445 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Foxr2Q3UM89 302 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Faap20Q3UN58 186 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Guk1Q64520 198 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Doxl2Q6IMK7 723 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Adprhl1Q8BGK2 353 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 F830045P16RikQ8BJ95 487 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Prss50Q8BLH5 439 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Olfr1347Q8VF33 319 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Q91WE4 72 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Ear6Q923L7 155 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Cnih4Q9CX13 139 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Wdr20Q9D5R2 567 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Ccnl2Q9JJA7 518 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 Anxa10Q9QZ10 324 aa11.6□□□□□ -0.55
Nup88-203ENSMUST00000108531 AgrnA2ASQ1 1950 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Gm35315A0A1B0GRI2 571 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Cdc20bD3Z3I0 519 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Vmn1r7E9Q8T0 311 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Gm10428J3QNV7 132 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Mcpt9O35164 246 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Hbb-bh1P04444 147 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Gp6P0C191 313 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Selenbp1P17563 472 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Hoxd12P23812 268 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Foxa3P35584 353 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Atp5j2P56135 88 aaKnown RBP11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 CslQ80X68 466 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Rtp2Q80ZI2 223 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Olfr1395Q8VGD7 317 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Olfr283Q8VGU2 309 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Nop16Q9CPT5 178 aaKnown RBP11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Med8Q9D7W5 268 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Tspan32Q9JHH2 256 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Paqr4Q9JJE4 273 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Rgs21V9GXQ3 152 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Vmn1r124D3YTX4 307 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Olfr568E9Q554 313 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 4930522L14RikE9QAG4 666 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Gm8356J3QPD3 205 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Gm3685J3QPP2 205 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Vmn1r103K7N6X7 305 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Vmn1r122K7N726 305 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Vmn1r151L7N288 305 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 NodalP43021 354 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Psg26Q4KL65 475 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Zfp933Q6PEE4 468 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Tmem164Q6PHN7 296 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Neil1Q8K4Q6 389 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Asb10Q91ZT7 467 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Polr2hQ923G2 150 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Spef1Q99JL1 234 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Ufsp2Q99K23 461 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Xrcc2Q9CX47 278 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Marveld3Q9D956 376 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 1700013G24RikQ9DAC6 286 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Rp2Q9EPK2 347 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Fn3kQ9ER35 309 aa11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Klf5Q9Z0Z7 446 aaKnown RBP11.59□□□□□ -0.55
Nup88-203ENSMUST00000108531 Olfr65A0A1B0GSF4 315 aa11.58□□□□□ -0.56
Nup88-203ENSMUST00000108531 Rnaset2aC0HKG5 259 aa11.58□□□□□ -0.56
Nup88-203ENSMUST00000108531 Rnaset2bC0HKG6 259 aa11.58□□□□□ -0.56
Nup88-203ENSMUST00000108531 Gm8159E9Q0R1 267 aa11.58□□□□□ -0.56
Nup88-203ENSMUST00000108531 Gm21103E9Q2Q1 267 aa11.58□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms