RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Il1r1P13504 576 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 JPT1P97825 154 aaKnown RBP14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Nxt2Q3UNA4 142 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Znf629Q6A085 867 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Doxl2Q6IMK7 723 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Klhl9Q6ZPT1 617 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr201Q7TS38 308 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Znf2Q8BIQ3 427 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Slc30a6Q8BJM5 460 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Gm9999Q8C5Y2 53 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Seh1lQ8R2U0 360 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr1423Q8VFV0 310 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 PpifQ99KR7 206 aaKnown RBP14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 SelenosQ9BCZ4 190 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Cnih4Q9CX13 139 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Mrto4Q9D0I8 239 aaKnown RBP14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Izumo1Q9D9J7 397 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Stpg4Q9DAG5 247 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Taf8Q9EQH4 308 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Galnt16Q9JJ61 558 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Ccnl2Q9JJA7 518 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Rgs21V9GXQ3 152 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Vmn2r80E9Q1L0 863 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Gm3727J3QM54 205 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Capn1O35350 713 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 MosP00536 390 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Rab11bP46638 218 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Taf13P61216 124 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Agbl5Q09M02 886 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Rpusd3Q14AI6 344 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 B3gnt4Q1RLK6 350 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 SrmQ64674 302 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr1115Q7TR53 326 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Zfp9Q8BIS1 454 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 LiphQ8CIV3 451 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 CcnqQ8QZR8 250 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr1424Q8VFV1 313 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Arpc5Q9CPW4 151 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Wdr5bQ9D7H2 328 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Sult2a4L7N245 285 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 H1f0P10922 194 aaKnown RBP14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Id1P20067 168 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Pcbp4P57724 403 aaKnown RBP14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Il11ra1Q64385 432 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr776Q7TRI3 312 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Acot4Q8BWN8 421 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Defb21Q8C5Z4 100 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 March11Q8CBH7 400 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Med25Q8VCB2 745 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr1395Q8VGD7 317 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 DapQ91XC8 102 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Tssk4Q9D411 328 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Srxn1Q9D975 136 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 D17h6s53eQ9Z1R4 293 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Ubl3Q9Z2M6 117 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Sirpb1bA0A0A6YXN8 397 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Gpr155A2AWR3 868 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Gprin2D3Z1D7 455 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Sirpb1cK7N6K7 397 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 P01822 137 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 SparcP07214 302 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Bmp8aP34821 399 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Rnf133Q14B02 382 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 9130023H24RikQ8BG98 337 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Nob1Q8BW10 403 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Upp2Q8CGR7 320 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Pom121Q8K3Z9 1200 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr828Q8VFM8 312 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr1501Q8VFQ3 315 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Spaca7Q9D2S4 182 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Bbs10Q9DBI2 713 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Espl1P60330 2118 aa14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Tnrc6aQ3UHK8 1896 aaKnown RBP14.73□□□□□ -0.05
Shh-201ENSMUST00000002708 Gm10439A2AJU2 433 aaKnown RBP14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Ttll3A4Q9E5 927 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Gm15114B1B0X6 433 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 BC051665E9Q623 330 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Mex3dQ3UE17 643 aaKnown RBP14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Faap20Q3UN58 186 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Rcc1Q8VE37 421 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Mrgpra8Q91ZC4 305 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Pga5Q9D106 387 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Trp53tg5Q9D976 238 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Nudt22Q9DD16 308 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Elp4Q9ER73 422 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Mrps34Q9JIK9 218 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Grap2O89100 322 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 GastP48757 101 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Slc30a2Q2HJ10 371 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Sim2Q61079 657 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Slc35f4Q8BZK4 485 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Fbxw19Q8C2W8 466 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Iglon5Q8HW98 336 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Aspscr1Q8VBT9 550 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Chrdl2Q8VEA6 426 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr1238Q8VG59 315 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Pcbd2Q9CZL5 136 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 ShpkQ9D5J6 476 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 EqtnQ9D9V2 337 aa14.72□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr888Q9EQA5 314 aa14.72□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms