RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 SYNPRQ8TBG9 265 aa10.58□□□□□ -0.72
LINC00339-213ENST00000642137 OR51E1Q8TCB6 317 aa10.58□□□□□ -0.72
LINC00339-213ENST00000642137 KLF14Q8TD94 323 aaPredicted RBP10.58□□□□□ -0.72
LINC00339-213ENST00000642137 GHSRQ92847 366 aa10.58□□□□□ -0.72
LINC00339-213ENST00000642137 UFD1Q92890 307 aa10.58□□□□□ -0.72
LINC00339-213ENST00000642137 MUL1Q969V5 352 aa10.58□□□□□ -0.72
LINC00339-213ENST00000642137 CMBLQ96DG6 245 aa10.58□□□□□ -0.72
LINC00339-213ENST00000642137 LYZL4Q96KX0 146 aa10.58□□□□□ -0.72
LINC00339-213ENST00000642137 OPALINQ96PE5 141 aa10.58□□□□□ -0.72
LINC00339-213ENST00000642137 ZNF281Q9Y2X9 895 aa10.58□□□□□ -0.72
LINC00339-213ENST00000642137 IGLV3-9A0A075B6K5 115 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 A0A1B0GVI7 797 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 P2RY10O00398 339 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 SYT7O43581 403 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 IGHV3-13P01766 116 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 KITLGP21583 273 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 ACHEP22303 614 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 PSMB9P28065 219 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 SLC3A1Q07837 685 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 PSG7Q13046 419 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 HLXQ14774 488 aaPredicted RBP10.57□□□□□ -0.72
LINC00339-213ENST00000642137 MOGQ16653 247 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 SPATA46Q5T0L3 261 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 VHLLQ6RSH7 139 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 MRPL21Q7Z2W9 205 aaKnown RBP10.57□□□□□ -0.72
LINC00339-213ENST00000642137 PHC2Q8IXK0 858 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 RDH10Q8IZV5 341 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 NEUROG1Q92886 237 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 MRPL24Q96A35 216 aaKnown RBP10.57□□□□□ -0.72
LINC00339-213ENST00000642137 PGLYRP3Q96LB9 341 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 PDCD1LG2Q9BQ51 273 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 GPR84Q9NQS5 396 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 SCOCQ9UIL1 159 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 HHLA2Q9UM44 414 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 FLNCQ14315 2725 aa10.57□□□□□ -0.72
LINC00339-213ENST00000642137 hCG_38984A0A1B0GV85 526 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 GGT3PA6NGU5 568 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 DHRS7CA6NNS2 312 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 CCRL2O00421 344 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 HS3ST1O14792 307 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 DHRS3O75911 302 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 TFAP2AP05549 437 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 OR4A8P0C604 315 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 SERPINF1P36955 418 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 MPV17P39210 176 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 MAP2K3P46734 347 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 GSK3AP49840 483 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 GP2P55259 537 aaKnown RBP10.56□□□□□ -0.72
LINC00339-213ENST00000642137 OR8B8Q15620 311 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 TRAM1Q15629 374 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 ADIPOQQ15848 244 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 TSTQ16762 297 aaKnown RBP10.56□□□□□ -0.72
LINC00339-213ENST00000642137 MSMPQ1L6U9 139 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 ODF4Q2M2E3 257 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 GFOD2Q3B7J2 385 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 YIF1BQ5BJH7 314 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 LIPKQ5VXJ0 399 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 KRT74Q7RTS7 529 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 CSNK2A3Q8NEV1 391 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 OR14K1Q8NGZ2 314 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 GPR148Q8TDV2 347 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 FBXW5Q969U6 566 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 C10orf35Q96D05 121 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 SOX7Q9BT81 388 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 MRPL37Q9BZE1 423 aaKnown RBP10.56□□□□□ -0.72
LINC00339-213ENST00000642137 DUSP13Q9UII6 198 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 PURGQ9UJV8 347 aaKnown RBP10.56□□□□□ -0.72
LINC00339-213ENST00000642137 SF3B6Q9Y3B4 125 aaKnown RBP10.56□□□□□ -0.72
LINC00339-213ENST00000642137 V9GYS6 101 aa10.56□□□□□ -0.72
LINC00339-213ENST00000642137 ANKHD1Q8IWZ3 2542 aaKnown RBP10.56□□□□□ -0.72
LINC00339-213ENST00000642137 PKDREJQ9NTG1 2253 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 PNMA8CA0A1B0GUJ8 204 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 LOC107986453A0A1B0GWG9 222 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 A0A1W2PPR1 153 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 CD300LBA8K4G0 201 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 IQCF6A8MYZ5 107 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 B9A039 149 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 PSMA1P25786 263 aaKnown RBP10.55□□□□□ -0.72
LINC00339-213ENST00000642137 SSTR2P30874 369 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 TTKP33981 857 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 LIPAP38571 399 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 RPL5P46777 297 aaKnown RBP10.55□□□□□ -0.72
LINC00339-213ENST00000642137 ALDH3B2P48448 385 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 KLF3P57682 345 aaPredicted RBP10.55□□□□□ -0.72
LINC00339-213ENST00000642137 RPS11P62280 158 aaKnown RBP eCLIP10.55□□□□□ -0.72
LINC00339-213ENST00000642137 RIPPLY1Q0D2K3 151 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 TNK1Q13470 666 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 EFNB3Q15768 340 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 SSX1Q16384 188 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 ZBTB37Q5TC79 503 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 OR2T2Q6IF00 324 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 UNQ9370/PRO34162Q6UXP9 181 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 LRP11Q86VZ4 500 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 COMMD2Q86X83 199 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 FBXL14Q8N1E6 418 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 ZNF611Q8N823 705 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 SEMA6DQ8NFY4 1073 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 FAM71F1Q96KD3 344 aaPredicted RBP10.55□□□□□ -0.72
LINC00339-213ENST00000642137 PLK3Q9H4B4 646 aa10.55□□□□□ -0.72
LINC00339-213ENST00000642137 GPR160Q9UJ42 338 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms