RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 HIST1H2AAQ96QV6 131 aa11.18□□□□□ -0.62
PHGDH-218ENST00000641491 OR5M11Q96RB7 305 aa11.18□□□□□ -0.62
PHGDH-218ENST00000641491 TMED9Q9BVK6 235 aa11.18□□□□□ -0.62
PHGDH-218ENST00000641491 OR2J1Q9GZK6 312 aa11.18□□□□□ -0.62
PHGDH-218ENST00000641491 DYNLRB1Q9NP97 96 aa11.18□□□□□ -0.62
PHGDH-218ENST00000641491 GPR84Q9NQS5 396 aa11.18□□□□□ -0.62
PHGDH-218ENST00000641491 NKIRAS2Q9NYR9 191 aa11.18□□□□□ -0.62
PHGDH-218ENST00000641491 CISD1Q9NZ45 108 aaKnown RBP11.18□□□□□ -0.62
PHGDH-218ENST00000641491 ZNF281Q9Y2X9 895 aa11.18□□□□□ -0.62
PHGDH-218ENST00000641491 FREM1Q5H8C1 2179 aa11.18□□□□□ -0.62
PHGDH-218ENST00000641491 CRYBG3Q68DQ2 2970 aa11.18□□□□□ -0.62
PHGDH-218ENST00000641491 F8P00451 2351 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.17□□□□□ -0.62
PHGDH-218ENST00000641491 DDOSTP39656 456 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 GTF2A1P52655 376 aaPredicted RBP11.17□□□□□ -0.62
PHGDH-218ENST00000641491 MZT1Q08AG7 82 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 RIPPLY1Q0D2K3 151 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 GPR50Q13585 617 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 KRTAP27-1Q3LI81 207 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 ZNF672Q499Z4 452 aaPredicted RBP11.17□□□□□ -0.62
PHGDH-218ENST00000641491 YIF1BQ5BJH7 314 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 FDX2Q6P4F2 183 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 PAMR1Q6UXH9 720 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 C22orf34Q6ZV56 151 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 ZNF101Q8IZC7 436 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 OR2AE1Q8NHA4 323 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 ITFG2Q969R8 447 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 DHRS9Q9BPW9 319 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 SLITRK2Q9H156 845 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 CLEC4MQ9H2X3 399 aaPredicted RBP11.17□□□□□ -0.62
PHGDH-218ENST00000641491 ZNF442Q9H7R0 627 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 ABCB9Q9NP78 766 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 EXOSC4Q9NPD3 245 aaKnown RBP11.17□□□□□ -0.62
PHGDH-218ENST00000641491 CYSLTR2Q9NS75 346 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 CGGBP1Q9UFW8 167 aaPredicted RBP11.17□□□□□ -0.62
PHGDH-218ENST00000641491 ENPP5Q9UJA9 477 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 FZR1Q9UM11 496 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 SLC22A13Q9Y226 551 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 STARD10Q9Y365 291 aa11.17□□□□□ -0.62
PHGDH-218ENST00000641491 ANXA2P2A6NMY6 339 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 DEFB108AA8MXU0 73 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 H3BSH0 61 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 MAGEB3O15480 346 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 ICMTO60725 284 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 GATBO75879 557 aaKnown RBP11.16□□□□□ -0.62
PHGDH-218ENST00000641491 DHRS3O75911 302 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 RGS9O75916 674 aaPredicted RBP11.16□□□□□ -0.62
PHGDH-218ENST00000641491 NGFP01138 241 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 HLA-DPB1P04440 258 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 OR4A8P0C604 315 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 RAC2P15153 192 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 CD53P19397 219 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 TNFSF4P23510 183 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 SSTR2P30874 369 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 GABRA5P31644 462 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 APOBEC3AP31941 199 aaPredicted RBP11.16□□□□□ -0.62
PHGDH-218ENST00000641491 THBS4P35443 961 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 SERPINF1P36955 418 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 LIPAP38571 399 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 PPP3R1P63098 170 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 TLE4Q04727 773 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 AGAP6Q5VW22 663 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 NAA40Q86UY6 237 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 PRSS35Q8N3Z0 413 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 KLF14Q8TD94 323 aaPredicted RBP11.16□□□□□ -0.62
PHGDH-218ENST00000641491 GHSRQ92847 366 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 CMBLQ96DG6 245 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 CPNE2Q96FN4 548 aaPredicted RBP11.16□□□□□ -0.62
PHGDH-218ENST00000641491 PDCD1LG2Q9BQ51 273 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 SYT3Q9BQG1 590 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 PAPOLGQ9BWT3 736 aaKnown RBP11.16□□□□□ -0.62
PHGDH-218ENST00000641491 SLC22A4Q9H015 551 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 G6PC2Q9NQR9 355 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 FRRS1LQ9P0K9 344 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 PIGLQ9Y2B2 252 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 LSM2Q9Y333 95 aaKnown RBP11.16□□□□□ -0.62
PHGDH-218ENST00000641491 ZFHX3Q15911 3703 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 ITPR3Q14573 2671 aa11.16□□□□□ -0.62
PHGDH-218ENST00000641491 PCNX1Q96RV3 2341 aa11.15□□□□□ -0.62
PHGDH-218ENST00000641491 CCDC160A6NGH7 325 aa11.15□□□□□ -0.62
PHGDH-218ENST00000641491 ZNF879B4DU55 563 aa11.15□□□□□ -0.62
PHGDH-218ENST00000641491 E9PI62 339 aa11.15□□□□□ -0.62
PHGDH-218ENST00000641491 HS3ST1O14792 307 aa11.15□□□□□ -0.62
PHGDH-218ENST00000641491 TPD52L2O43399 206 aaKnown RBP11.15□□□□□ -0.62
PHGDH-218ENST00000641491 PLPP2O43688 288 aa11.15□□□□□ -0.62
PHGDH-218ENST00000641491 INMTO95050 263 aa11.15□□□□□ -0.62
PHGDH-218ENST00000641491 PNPP00491 289 aa11.15□□□□□ -0.62
PHGDH-218ENST00000641491 TTRP02766 147 aa11.15□□□□□ -0.62
PHGDH-218ENST00000641491 CPEP16870 476 aa11.15□□□□□ -0.62
PHGDH-218ENST00000641491 PCMT1P22061 227 aa11.15□□□□□ -0.62
PHGDH-218ENST00000641491 TTKP33981 857 aa11.15□□□□□ -0.62
PHGDH-218ENST00000641491 ZNF92Q03936 586 aa11.15□□□□□ -0.62
PHGDH-218ENST00000641491 HGFACQ04756 655 aa11.15□□□□□ -0.62
PHGDH-218ENST00000641491 GK2Q14410 553 aaPredicted RBP11.15□□□□□ -0.62
PHGDH-218ENST00000641491 HLXQ14774 488 aaPredicted RBP11.15□□□□□ -0.62
PHGDH-218ENST00000641491 MBNL2Q5VZF2 373 aaKnown RBP11.15□□□□□ -0.62
PHGDH-218ENST00000641491 FBXW12Q6X9E4 464 aa11.15□□□□□ -0.62
PHGDH-218ENST00000641491 COLCA1Q6ZS62 124 aa11.15□□□□□ -0.62
PHGDH-218ENST00000641491 OR5AS1Q8N127 324 aa11.15□□□□□ -0.62
PHGDH-218ENST00000641491 MUC15Q8N387 334 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms