RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 OR13C9Q8NGT0 318 aa13.29□□□□□ -0.28
TRIM3-215ENST00000639856 DVL3Q92997 716 aaPredicted RBP13.29□□□□□ -0.28
TRIM3-215ENST00000639856 BOKQ9UMX3 212 aaPredicted RBP13.29□□□□□ -0.28
TRIM3-215ENST00000639856 ZNF407Q9C0G0 2248 aa13.29□□□□□ -0.28
TRIM3-215ENST00000639856 SMAD9O15198 467 aaKnown RBP13.28□□□□□ -0.28
TRIM3-215ENST00000639856 TSC22D2O75157 780 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 BPNT1O95861 308 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 ERCC1P07992 297 aaPredicted RBP13.28□□□□□ -0.28
TRIM3-215ENST00000639856 SLC2A1P11166 492 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 ZNF20P17024 532 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 WT1P19544 449 aaPredicted RBP13.28□□□□□ -0.28
TRIM3-215ENST00000639856 GUCA1AP43080 201 aaPredicted RBP13.28□□□□□ -0.28
TRIM3-215ENST00000639856 ZNF133P52736 654 aaPredicted RBP13.28□□□□□ -0.28
TRIM3-215ENST00000639856 GRB2P62993 217 aaKnown RBP13.28□□□□□ -0.28
TRIM3-215ENST00000639856 C10orf128Q5T292 105 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 ABHD12BQ7Z5M8 362 aaPredicted RBP13.28□□□□□ -0.28
TRIM3-215ENST00000639856 PAQR4Q8N4S7 273 aaPredicted RBP13.28□□□□□ -0.28
TRIM3-215ENST00000639856 TMEM54Q969K7 222 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 ZNF416Q9BWM5 594 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 ZNF703Q9H7S9 590 aaPredicted RBP13.28□□□□□ -0.28
TRIM3-215ENST00000639856 ZMAT3Q9HA38 289 aaKnown RBP13.28□□□□□ -0.28
TRIM3-215ENST00000639856 CA10Q9NS85 328 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 ZNF319Q9P2F9 582 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 ZNF107Q9UII5 783 aaPredicted RBP13.28□□□□□ -0.28
TRIM3-215ENST00000639856 SLC5A6Q9Y289 635 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 GJE1A6NN92 205 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 FAM166BA8MTA8 275 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 NPIPA2E9PIF3 369 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 NPIPA3F8WFD2 350 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 RAB27BO00194 218 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 ALX3O95076 343 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 RLN1P04808 185 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 TPOP07202 933 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 MELTFP08582 738 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 LIPCP11150 499 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 CX3CR1P49238 355 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 CLDN15P56746 228 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 QRFPP83859 136 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 SGCAQ16586 387 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 LGALSLQ3ZCW2 172 aaPredicted RBP13.28□□□□□ -0.28
TRIM3-215ENST00000639856 COMMD2Q86X83 199 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 CDH26Q8IXH8 852 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 ACBD4Q8NC06 268 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 OR9K2Q8NGE7 335 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 OR52B4Q8NGK2 314 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 KCNE4Q8WWG9 221 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 RADILQ96JH8 1075 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 NELFAQ9H3P2 528 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 GPR84Q9NQS5 396 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 ELF5Q9UKW6 265 aaPredicted RBP13.28□□□□□ -0.28
TRIM3-215ENST00000639856 AKAP13Q12802 2813 aa13.28□□□□□ -0.28
TRIM3-215ENST00000639856 DNAJC13O75165 2243 aa13.27□□□□□ -0.28
TRIM3-215ENST00000639856 ANKRD34BA5PLL1 514 aa13.27□□□□□ -0.28
TRIM3-215ENST00000639856 TOXO94900 526 aa13.27□□□□□ -0.28
TRIM3-215ENST00000639856 RAB3DO95716 219 aa13.27□□□□□ -0.28
TRIM3-215ENST00000639856 CYB5AP00167 134 aa13.27□□□□□ -0.28
TRIM3-215ENST00000639856 GIPP09681 153 aaPredicted RBP13.27□□□□□ -0.28
TRIM3-215ENST00000639856 CEACAM1P13688 526 aa13.27□□□□□ -0.28
TRIM3-215ENST00000639856 ABOP16442 354 aa13.27□□□□□ -0.28
TRIM3-215ENST00000639856 POU3F2P20265 443 aaPredicted RBP13.27□□□□□ -0.28
TRIM3-215ENST00000639856 MSR1P21757 451 aa13.27□□□□□ -0.28
TRIM3-215ENST00000639856 CCL1P22362 96 aa13.27□□□□□ -0.28
TRIM3-215ENST00000639856 CTSSP25774 331 aa13.27□□□□□ -0.28
TRIM3-215ENST00000639856 ZNF93P35789 620 aaPredicted RBP13.27□□□□□ -0.28
TRIM3-215ENST00000639856 GFRA1P56159 465 aa13.27□□□□□ -0.28
TRIM3-215ENST00000639856 PER3P56645 1201 aa13.27□□□□□ -0.28
TRIM3-215ENST00000639856 UNC119Q13432 240 aa13.27□□□□□ -0.28
TRIM3-215ENST00000639856 PHYHD1Q5SRE7 291 aa13.27□□□□□ -0.28
TRIM3-215ENST00000639856 TMEM123Q8N131 208 aa13.27□□□□□ -0.28
TRIM3-215ENST00000639856 ZNF283Q8N7M2 679 aa13.27□□□□□ -0.28
TRIM3-215ENST00000639856 AQP3Q92482 292 aa13.27□□□□□ -0.28
TRIM3-215ENST00000639856 ZNF775Q96BV0 537 aaPredicted RBP13.27□□□□□ -0.28
TRIM3-215ENST00000639856 CHIAQ9BZP6 476 aa13.27□□□□□ -0.28
TRIM3-215ENST00000639856 DLL3Q9NYJ7 618 aa13.27□□□□□ -0.28
TRIM3-215ENST00000639856 PIPOXQ9P0Z9 390 aa13.27□□□□□ -0.28
TRIM3-215ENST00000639856 EIF3KQ9UBQ5 218 aaKnown RBP13.27□□□□□ -0.28
TRIM3-215ENST00000639856 URB1O60287 2271 aaKnown RBP13.27□□□□□ -0.29
TRIM3-215ENST00000639856 SPTBN2O15020 2390 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 UBE2QL1A1L167 161 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 TMEM235A6NFC5 223 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 CXCL13O43927 109 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 OR2A4O95047 310 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 VSIG8P0DPA2 414 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 ZNF260Q3ZCT1 412 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 ZBTB37Q5TC79 503 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 FOXL2NBQ6ZUU3 175 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 FAM57BQ71RH2 274 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 PGAP1Q75T13 922 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 ASCL5Q7RTU5 278 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 GALNTL5Q7Z4T8 443 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 MDS2Q8NDY4 140 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 OR8H1Q8NGG4 311 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 OR10D3Q8NH80 312 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 FAM46BQ96A09 425 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 ADGRG7Q96K78 797 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 OR2A7Q96R45 310 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 SOX7Q9BT81 388 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 TTTY12Q9BZ98 90 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 FBLN5Q9UBX5 448 aa13.27□□□□□ -0.29
TRIM3-215ENST00000639856 MRPS18CQ9Y3D5 142 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms