RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 ZNF610Q8N9Z0 462 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 PP6455Q8WZ26 134 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 AKAP1Q92667 903 aaKnown RBP eCLIP13.34□□□□□ -0.271e-11■■■□□ 16
CLN6-219ENST00000637329 SPSB4Q96A44 273 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 POM121L2Q96KW2 1035 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 ZNF75AQ96N20 296 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 ABRACLQ9P1F3 81 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 ZNF319Q9P2F9 582 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 V9GY05 133 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 NCOA6Q14686 2063 aaPredicted RBP13.34□□□□□ -0.27
CLN6-219ENST00000637329 LOC100509620A0A075B734 347 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 RGS5O15539 181 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 ICMTO60725 284 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 LCATP04180 440 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 ERCC1P07992 297 aaPredicted RBP13.33□□□□□ -0.28
CLN6-219ENST00000637329 ZNF14P17017 642 aaPredicted RBP13.33□□□□□ -0.28
CLN6-219ENST00000637329 ADRA2CP18825 462 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 PSMB1P20618 241 aaKnown RBP13.33□□□□□ -0.28
CLN6-219ENST00000637329 THBS4P35443 961 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 DDOSTP39656 456 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 RANBP1P43487 201 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 ZNF45Q02386 682 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 GFOD2Q3B7J2 385 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 SPANXN2Q5MJ10 180 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 IDNKQ5T6J7 187 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 ASPHD2Q6ICH7 369 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 ZNF529Q6P280 563 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 C3P1Q6ZMU1 363 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 BHLHA15Q7RTS1 189 aaPredicted RBP13.33□□□□□ -0.28
CLN6-219ENST00000637329 CCDC190Q86UF4 302 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 CXorf67Q86X51 503 aaPredicted RBP13.33□□□□□ -0.28
CLN6-219ENST00000637329 ZNF584Q8IVC4 421 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 OR5D14Q8NGL3 314 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 OR1J2Q8NGS2 313 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 OR14K1Q8NGZ2 314 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 APOBEC3DQ96AK3 386 aaPredicted RBP13.33□□□□□ -0.28
CLN6-219ENST00000637329 REEP6Q96HR9 211 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 FAM71F1Q96KD3 344 aaPredicted RBP13.33□□□□□ -0.28
CLN6-219ENST00000637329 LYZL4Q96KX0 146 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 CEP19Q96LK0 163 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 DMRTA2Q96SC8 542 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 GFI1Q99684 422 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 USB1Q9BQ65 265 aaKnown RBP13.33□□□□□ -0.28
CLN6-219ENST00000637329 PALMDQ9NP74 551 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 TAS2R4Q9NYW5 299 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 DAPK2Q9UIK4 370 aa13.33□□□□□ -0.28
CLN6-219ENST00000637329 UBR5O95071 2799 aaPredicted RBP13.33□□□□□ -0.28
CLN6-219ENST00000637329 A0A0G2JNJ9 132 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 C5orf49A4QMS7 147 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 OR5H1A6NKK0 313 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 CD37P11049 281 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 BMP4P12644 408 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 ANOS1P23352 680 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 IL32P24001 234 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 CAPZA1P52907 286 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 PMPCAQ10713 525 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 MRPL49Q13405 166 aaKnown RBP13.32□□□□□ -0.28
CLN6-219ENST00000637329 TBC1D28Q2M2D7 210 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 SLC25A35Q3KQZ1 300 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 ZBTB37Q5TC79 503 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 GLT8D1Q68CQ7 371 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 NAA40Q86UY6 237 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 LAX1Q8IWV1 398 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 CDH26Q8IXH8 852 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 SLC30A7Q8NEW0 376 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 BORCS5Q969J3 196 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 FGGYQ96C11 551 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 FOXRED1Q96CU9 486 aaPredicted RBP13.32□□□□□ -0.28
CLN6-219ENST00000637329 ORAI1Q96D31 301 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 CMTM3Q96MX0 182 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 Q9UFV3 132 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 AK6Q9Y3D8 172 aaKnown RBP13.32□□□□□ -0.28
CLN6-219ENST00000637329 N6AMT1Q9Y5N5 214 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 DOPEY2Q9Y3R5 2298 aa13.32□□□□□ -0.28
CLN6-219ENST00000637329 FREM1Q5H8C1 2179 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 hCG_38984A0A1B0GV85 526 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 H3BSH0 61 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 CTDSP2O14595 271 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 SULT1B1O43704 296 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 ALX3O95076 343 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 IGKV3-15P01624 115 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 MAS1P04201 325 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 CALCBP10092 127 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 CBR1P16152 277 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 ATF1P18846 271 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 RAB3AP20336 220 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 CD40LGP29965 261 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 GNALP38405 381 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 CA7P43166 264 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 MALLQ13021 153 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 DCTN2Q13561 401 aaKnown RBP13.31□□□□□ -0.28
CLN6-219ENST00000637329 OR8B8Q15620 311 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 C3orf36Q3SXR2 165 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 GLYATL3Q5SZD4 288 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 ZNF474Q6S9Z5 364 aaPredicted RBP13.31□□□□□ -0.28
CLN6-219ENST00000637329 UTS2BQ765I0 119 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 SSX8Q7RTT4 187 aa13.31□□□□□ -0.28
CLN6-219ENST00000637329 LRRC28Q86X40 367 aaPredicted RBP13.31□□□□□ -0.28
CLN6-219ENST00000637329 TRMT10AQ8TBZ6 339 aaKnown RBP13.31□□□□□ -0.28
CLN6-219ENST00000637329 SGK3Q96BR1 496 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms