RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 UNC119Q13432 240 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 TFDP2Q14188 446 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 EDDM3AQ14507 147 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 ZNF235Q14590 738 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 GRK1Q15835 563 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 C3AR1Q16581 482 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 HIST3H3Q16695 136 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 TTLL9Q3SXZ7 439 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 PHLDA2Q53GA4 152 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 TMEM97Q5BJF2 176 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 FFAR4Q5NUL3 377 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 CPTPQ5TA50 214 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 C1orf189Q5VU69 101 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 UBE2UQ5VVX9 321 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 ZNF324BQ6AW86 544 aaPredicted RBP2.47□□□□□ -2.01
PSPC1-208ENST00000635562 LPCAT3Q6P1A2 487 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 SPSB3Q6PJ21 355 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 SMARCD3Q6STE5 483 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 CMC1Q7Z7K0 106 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 ISCA2Q86U28 154 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 CPNE9Q8IYJ1 553 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 OR2L13Q8N349 312 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 ARIH2OSQ8N7S6 290 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 OR5M9Q8NGP3 310 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 OR1S2Q8NGQ3 325 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 OR1K1Q8NGR3 316 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 OR1P1Q8NH06 330 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 OR56B4Q8NH76 319 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 CNIH3Q8TBE1 160 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 ABHD3Q8WU67 409 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 SDR42E1Q8WUS8 393 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 C1orf54Q8WWF1 131 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 CRYGNQ8WXF5 182 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 ASB17Q8WXJ9 295 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 RGP1Q92546 391 aaPredicted RBP2.47□□□□□ -2.01
PSPC1-208ENST00000635562 DNAJC19Q96DA6 116 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 IMP4Q96G21 291 aaKnown RBP2.47□□□□□ -2.01
PSPC1-208ENST00000635562 WBP1Q96G27 269 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 PYURFQ96I23 114 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 CAPNS2Q96L46 248 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 ZNF599Q96NL3 588 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 TMEM121Q9BTD3 319 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 C1QTNF4Q9BXJ3 329 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 CHIAQ9BZP6 476 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 GLIPR2Q9H4G4 154 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 NHEJ1Q9H9Q4 299 aaPredicted RBP2.47□□□□□ -2.01
PSPC1-208ENST00000635562 SIAEQ9HAT2 523 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 OLFML3Q9NRN5 406 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 SPANXA1Q9NS26 97 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 RNF186Q9NXI6 227 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 B3GNT2Q9NY97 397 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 MDFICQ9P1T7 246 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 MUTYHQ9UIF7 546 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 TP53TG1Q9Y2A0 90 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 UFC1Q9Y3C8 167 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 WIPI2Q9Y4P8 454 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 DHX57Q6P158 1386 aaKnown RBP2.47□□□□□ -2.01
PSPC1-208ENST00000635562 BRCA1P38398 1863 aaKnown RBP2.46□□□□□ -2.02
PSPC1-208ENST00000635562 CACNA1SQ13698 1873 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 SOGA1O94964 1423 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 SETD5Q9C0A6 1442 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 SAA2-SAA4A0A096LPE2 208 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 TRBV4-1A0A0J9YWV2 114 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 ZNF816-ZNF321PA0A0X1KG74 233 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 A0A1W2PS18 150 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 C15orf62A8K5M9 175 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 HACD1B0YJ81 288 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 ANKRD63C9JTQ0 380 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 PRAC2D3DTV9 90 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 GAPDHSO14556 408 aaPredicted RBP2.46□□□□□ -2.02
PSPC1-208ENST00000635562 ENSAO43768 121 aaKnown RBP2.46□□□□□ -2.02
PSPC1-208ENST00000635562 PRKNO60260 465 aaPredicted RBP2.46□□□□□ -2.02
PSPC1-208ENST00000635562 DUSP11O75319 330 aaKnown RBP2.46□□□□□ -2.02
PSPC1-208ENST00000635562 POP7O75817 140 aaKnown RBP2.46□□□□□ -2.02
PSPC1-208ENST00000635562 CNMDO75829 334 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 ANXA9O76027 345 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 MT-CO2P00403 227 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 CD8AP01732 235 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 TFAP2AP05549 437 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 HOXC4P09017 264 aaPredicted RBP2.46□□□□□ -2.02
PSPC1-208ENST00000635562 GIPP09681 153 aaPredicted RBP2.46□□□□□ -2.02
PSPC1-208ENST00000635562 MBL2P11226 248 aaPredicted RBP2.46□□□□□ -2.02
PSPC1-208ENST00000635562 GPX2P18283 190 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 PRKACGP22612 351 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 OMGP23515 440 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 EDNRAP25101 427 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 AKR1C3P42330 323 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 GLP1RP43220 463 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 OR3A2P47893 321 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 ZFP36L2P47974 494 aaKnown RBP2.46□□□□□ -2.02
PSPC1-208ENST00000635562 SERPINB10P48595 397 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 GAS1P54826 345 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 DLX6P56179 175 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 FBXW4P57775 412 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 RAB8AP61006 207 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 GNG3P63215 75 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 CX3CL1P78423 397 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 RGS1Q08116 209 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 RAB40BQ12829 278 aa2.46□□□□□ -2.02
PSPC1-208ENST00000635562 FAM53BQ14153 422 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms