RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 DDOSTP39656 456 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 HCCSP53701 268 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 BTG1P62324 171 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 MZT1Q08AG7 82 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 GFOD2Q3B7J2 385 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 C12orf73Q69YU5 71 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 IL17RELQ6ZVW7 336 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 C1orf87Q8N0U7 546 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 KLHL36Q8N4N3 616 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 SPICQ8N5J4 248 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 CELF2-AS1Q8N7Q2 184 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 ZNF420Q8TAQ5 688 aaPredicted RBP13.24□□□□□ -0.29
LINC00339-207ENST00000634712 TMEM163Q8TC26 289 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 REEP6Q96HR9 211 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 IL4I1Q96RQ9 567 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 PKP2Q99959 881 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 NIPAL2Q9H841 368 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 DCAF16Q9NXF7 216 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 MRPL15Q9P015 296 aaKnown RBP13.24□□□□□ -0.29
LINC00339-207ENST00000634712 TRAV20A0A0B4J274 112 aa13.23□□□□□ -0.29
LINC00339-207ENST00000634712 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.23□□□□□ -0.29
LINC00339-207ENST00000634712 C5orf63A6NC05 138 aa13.23□□□□□ -0.29
LINC00339-207ENST00000634712 SLC22A31A6NKX4 558 aa13.23□□□□□ -0.29
LINC00339-207ENST00000634712 TMEM178BH3BS89 294 aa13.23□□□□□ -0.29
LINC00339-207ENST00000634712 M0R129 80 aa13.23□□□□□ -0.29
LINC00339-207ENST00000634712 IGHV2-70P01814 119 aa13.23□□□□□ -0.29
LINC00339-207ENST00000634712 ALOX5APP20292 161 aa13.23□□□□□ -0.29
LINC00339-207ENST00000634712 SRP14P37108 136 aaKnown RBP13.23□□□□□ -0.29
LINC00339-207ENST00000634712 MMP16P51512 607 aa13.23□□□□□ -0.29
LINC00339-207ENST00000634712 NXNL2Q5VZ03 156 aa13.23□□□□□ -0.29
LINC00339-207ENST00000634712 LRRN1Q6UXK5 716 aa13.23□□□□□ -0.29
LINC00339-207ENST00000634712 LRRC28Q86X40 367 aaPredicted RBP13.23□□□□□ -0.29
LINC00339-207ENST00000634712 GID4Q8IVV7 300 aa13.23□□□□□ -0.29
LINC00339-207ENST00000634712 SPERTQ8NA61 448 aa13.23□□□□□ -0.29
LINC00339-207ENST00000634712 OR56B2PQ8NGI1 322 aa13.23□□□□□ -0.29
LINC00339-207ENST00000634712 OR11L1Q8NGX0 322 aa13.23□□□□□ -0.29
LINC00339-207ENST00000634712 ERGIC1Q969X5 290 aa13.23□□□□□ -0.29
LINC00339-207ENST00000634712 SPSB4Q96A44 273 aa13.23□□□□□ -0.29
LINC00339-207ENST00000634712 SGK3Q96BR1 496 aa13.23□□□□□ -0.29
LINC00339-207ENST00000634712 CNN2Q99439 309 aaKnown RBP13.23□□□□□ -0.29
LINC00339-207ENST00000634712 ADAT1Q9BUB4 502 aaKnown RBP13.23□□□□□ -0.29
LINC00339-207ENST00000634712 MROQ9BYG7 248 aa13.23□□□□□ -0.29
LINC00339-207ENST00000634712 TANC2Q9HCD6 1990 aa13.23□□□□□ -0.29
LINC00339-207ENST00000634712 A0A1B0GWJ7 208 aa13.22□□□□□ -0.29
LINC00339-207ENST00000634712 CCDC182A6NF36 153 aa13.22□□□□□ -0.29
LINC00339-207ENST00000634712 CYB5R3P00387 301 aaPredicted RBP13.22□□□□□ -0.29
LINC00339-207ENST00000634712 MDH2P40926 338 aaKnown RBP13.22□□□□□ -0.29
LINC00339-207ENST00000634712 CD200P41217 278 aa13.22□□□□□ -0.29
LINC00339-207ENST00000634712 HNRNPA0Q13151 305 aaKnown RBP13.22□□□□□ -0.29
LINC00339-207ENST00000634712 TMEM155Q4W5P6 130 aa13.22□□□□□ -0.29
LINC00339-207ENST00000634712 FAHD2BQ6P2I3 314 aaPredicted RBP13.22□□□□□ -0.29
LINC00339-207ENST00000634712 DEGS2Q6QHC5 323 aa13.22□□□□□ -0.29
LINC00339-207ENST00000634712 BCDIN3DQ7Z5W3 292 aaKnown RBP13.22□□□□□ -0.29
LINC00339-207ENST00000634712 KLBQ86Z14 1044 aa13.22□□□□□ -0.29
LINC00339-207ENST00000634712 MUC20Q8N307 709 aaPredicted RBP13.22□□□□□ -0.29
LINC00339-207ENST00000634712 ASB17Q8WXJ9 295 aa13.22□□□□□ -0.29
LINC00339-207ENST00000634712 FAHD2AQ96GK7 314 aa13.22□□□□□ -0.29
LINC00339-207ENST00000634712 RGCCQ9H4X1 137 aa13.22□□□□□ -0.29
LINC00339-207ENST00000634712 KLHDC2Q9Y2U9 406 aa13.22□□□□□ -0.29
LINC00339-207ENST00000634712 LRP12Q9Y561 859 aa13.22□□□□□ -0.29
LINC00339-207ENST00000634712 KIAA1324LA8MWY0 1029 aaPredicted RBP13.21□□□□□ -0.29
LINC00339-207ENST00000634712 H3BNX3 289 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 PLPP2O43688 288 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 ANOS1P23352 680 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 POLR2IP36954 125 aaKnown RBP13.21□□□□□ -0.29
LINC00339-207ENST00000634712 RBMXP38159 391 aaKnown RBP13.21□□□□□ -0.29
LINC00339-207ENST00000634712 GATA4P43694 442 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 CDC42P60953 191 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 EFNB1P98172 346 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 FAM3AP98173 230 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 MAB21L1Q13394 359 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 SNCBQ16143 134 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 ZNF181Q2M3W8 571 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 AADACL4Q5VUY2 407 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 PRSS45Q7RTY3 260 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 FTMTQ8N4E7 242 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 OR8S1Q8NH09 359 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 SIGLEC11Q96RL6 698 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 MNTQ99583 582 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 GABARAPL3Q9BY60 117 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 FN3KRPQ9HA64 309 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 UFSP2Q9NUQ7 469 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 C14orf119Q9NWQ9 140 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 IKZF2Q9UKS7 526 aa13.21□□□□□ -0.29
LINC00339-207ENST00000634712 PPIAL4EA0A075B759 164 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 PPIAL4DF5H284 164 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 PSMD9O00233 223 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 PHYHO14832 338 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 ZNF254O75437 659 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 FOXH1O75593 365 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 ZNF205O95201 554 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 PPIAL4FP0DN26 164 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 GNALP38405 381 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 GSK3AP49840 483 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 RIDAP52758 137 aaKnown RBP13.2□□□□□ -0.3
LINC00339-207ENST00000634712 PSMA6P60900 246 aaKnown RBP13.2□□□□□ -0.3
LINC00339-207ENST00000634712 ZMYND11Q15326 602 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 PRAMEF6Q5VXH4 476 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 SLC35F2Q8IXU6 374 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 ZNF679Q8IYX0 411 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms