RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 FAM221AA4D161 298 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 OR6C6A6NF89 314 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 M0R135 149 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 P2RY10O00398 339 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 SYT7O43581 403 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 IGLV3-1P01715 115 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 ITGA5P08648 1049 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 EPXP11678 715 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 ATF1P18846 271 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 MPGP29372 298 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 CHRNB4P30926 498 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 PPP3R1P63098 170 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 PSG4Q00888 419 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 CDSNQ15517 529 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 SLC36A2Q495M3 483 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 NSUN5P2Q63ZY6 315 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 RTL6Q6ICC9 239 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 ZNF774Q6NX45 483 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 C16orf87Q6PH81 154 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 ZNF433Q8N7K0 673 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 OR8B12Q8NGG6 310 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 OR13C3Q8NGS6 347 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 RND1Q92730 232 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 ZNF799Q96GE5 643 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 WNT5BQ9H1J7 359 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 ABCB9Q9NP78 766 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 KCNJ16Q9NPI9 418 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 SLC17A5Q9NRA2 495 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 CKLFQ9UBR5 152 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 KCNN3Q9UGI6 736 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 EDARQ9UNE0 448 aa8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 AK6Q9Y3D8 172 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-223ENST00000627587 A0A096LPE4 126 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 A0A0B4J203 849 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 A0A1B0GVI7 797 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 A0A1W2PPZ6 126 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 FIGNL2A6NMB9 653 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 ANXA2P2A6NMY6 339 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 WDR1O75083 606 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 TPOP07202 933 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 IGFBP3P17936 291 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 IGFBP2P18065 325 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 CD40LGP29965 261 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 KIR2DL2P43627 348 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 HTR5AP47898 357 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 PSMD7P51665 324 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 PPP5CP53041 499 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 TPTEP56180 551 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 FOXF2Q12947 444 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 ZNF79Q15937 498 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 SFRP5Q5T4F7 317 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 TFAP2EQ6VUC0 442 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 FAM57BQ71RH2 274 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 COMMD2Q86X83 199 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 RPRMLQ8N4K4 120 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 PARP16Q8N5Y8 322 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 CNEP1R1Q8N9A8 125 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 OR1F12Q8NHA8 337 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 AKR7LQ8NHP1 331 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 OR51E1Q8TCB6 317 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 PGAM5Q96HS1 289 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 OR2H1Q9GZK4 316 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 RNF121Q9H920 327 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 PALMDQ9NP74 551 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 ADAM30Q9UKF2 790 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 DCHS2Q6V1P9 2916 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 CCDC168Q8NDH2 2452 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 PRR14LQ5THK1 2151 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 AKAP9Q99996 3911 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 HPGDSO60760 199 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 TMEM127O75204 238 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 TOXO94900 526 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 PAHP00439 452 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 MAS1P04201 325 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 HOXD4P09016 255 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 FSTP19883 344 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 DRAM2Q6UX65 266 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 DMRTC2Q8IXT2 367 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 CPEB3Q8NE35 698 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 DNAAF1Q8NEP3 725 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 OR6K3Q8NGY3 331 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 LYZL4Q96KX0 146 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 SOSTQ9BQB4 213 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 ATPIF1Q9UII2 106 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 FOXJ3Q9UPW0 622 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 FAM215AQ9Y5M1 114 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 V9GY05 133 aa8.26□□□□□ -1.09
PDLIM5-223ENST00000627587 SETD2Q9BYW2 2564 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 MBD3L4A6NDZ8 208 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 MBD3L3A6NE82 208 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 MBD3L5A6NJ08 208 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 IFITM5A6NNB3 132 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 AIPO00170 330 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 TNFSF13O75888 250 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 CNOT4O95628 575 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 CD37P11049 281 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 ZNF12P17014 697 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 CCL1P22362 96 aa8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 APEX1P27695 318 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-223ENST00000627587 TGFBR3Q03167 851 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms