RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 RFLNAQ6ZTI6 216 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 ZNF687Q8N1G0 1237 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 SEMA6CQ9H3T2 930 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 STARD5Q9NSY2 213 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 PPP1R14DQ9NXH3 145 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 RUNX3Q13761 415 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 KIAA0040Q15053 153 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 LHFPL2Q6ZUX7 228 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 TMPRSS11FQ6ZWK6 438 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 GPR32P1Q8NGA4 272 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 TMEM37Q8WXS4 190 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 PARP11Q9NR21 331 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 LTBP3Q9NS15 1303 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 A0A1W2PR48 441 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 SDCBPO00560 298 aaPredicted RBP8.08□□□□□ -1.12
VCL-206ENST00000623461 CTAG2O75638 210 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 NXPH3O95157 252 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 OR5H8P0DN80 308 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 SDHBP21912 280 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 FKBP2P26885 142 aaKnown RBP8.08□□□□□ -1.12
VCL-206ENST00000623461 Q7L0L9 218 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 GRINAQ7Z429 371 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 HSD17B8Q92506 261 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 NUDT22Q9BRQ3 303 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 RARRES3Q9UL19 164 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 TMED3Q9Y3Q3 217 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 H0Y8G0 127 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 GP1BAP07359 652 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 PTGFRP43088 359 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 SLC25A1P53007 311 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 TAS2R45P59539 299 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 FOXO1Q12778 655 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 C1orf61Q13536 156 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 OR4N2Q8NGD1 307 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 RTN4IP1Q8WWV3 396 aaPredicted RBP8.08□□□□□ -1.12
VCL-206ENST00000623461 PIGTQ969N2 578 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 REEP6Q96HR9 211 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 SMDT1Q9H4I9 107 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 PSENENQ9NZ42 101 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 MMACHCQ9Y4U1 282 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 SULT1A1P50225 295 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 CLDN17P56750 224 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 BTG2P78543 158 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 NSUN5P2Q63ZY6 315 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 OR52N5Q8NH56 324 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 NXPE3Q969Y0 559 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 SLAMF6Q96DU3 332 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 SRPK3Q9UPE1 567 aa8.08□□□□□ -1.12
VCL-206ENST00000623461 RBFOX3A6NFN3 312 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 USF1P22415 310 aaPredicted RBP8.07□□□□□ -1.12
VCL-206ENST00000623461 CTBSQ01459 385 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 RPL7L1Q6DKI1 246 aaKnown RBP8.07□□□□□ -1.12
VCL-206ENST00000623461 LRRC18Q8N456 261 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 DMRT1Q9Y5R6 373 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 FZD6O60353 706 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 H2BFWTQ7Z2G1 175 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 ZNF761Q86XN6 746 aaPredicted RBP8.07□□□□□ -1.12
VCL-206ENST00000623461 ANAPC16Q96DE5 110 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 ARSGQ96EG1 525 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 KIR3DX1Q9H7L2 352 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 HEYLQ9NQ87 328 aaPredicted RBP8.07□□□□□ -1.12
VCL-206ENST00000623461 LHX6Q9UPM6 363 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 SSC5DA1L4H1 1573 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 TCRBV21S2A2A0A5A6 115 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 TMPRSS11DO60235 418 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 ZNF217O75362 1048 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 MBPP02686 304 aaPredicted RBP8.07□□□□□ -1.12
VCL-206ENST00000623461 PGA3P0DJD8 388 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 PI3P19957 117 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 ETFBKMTQ8IXQ9 262 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 RBMXL3Q8N7X1 1067 aaKnown RBP8.07□□□□□ -1.12
VCL-206ENST00000623461 POM121Q96HA1 1249 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 TMEM272A0A1B0GTI8 110 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 EIF1BO60739 113 aaKnown RBP8.07□□□□□ -1.12
VCL-206ENST00000623461 NAAAQ02083 359 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 TMEM52BQ4KMG9 183 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 RGS7BPQ6MZT1 257 aaPredicted RBP8.07□□□□□ -1.12
VCL-206ENST00000623461 CMBLQ96DG6 245 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 LIN7CQ9NUP9 197 aaKnown RBP8.07□□□□□ -1.12
VCL-206ENST00000623461 COL24A1Q17RW2 1714 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 PRAMEF4O60810 478 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 NMBP08949 121 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 CT45A6P0DMU7 189 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 CT45A5P0DMU8 189 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 CT45A7P0DMV0 189 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 CT45A8P0DMV1 189 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 CT45A9P0DMV2 189 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 ABOP16442 354 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 MPGP29372 298 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 CT45A2Q5DJT8 189 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 CT45A1Q5HYN5 189 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 CT45A3Q8NHU0 189 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 FBLIM1Q8WUP2 373 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 SIGLEC11Q96RL6 698 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 PBX4Q9BYU1 374 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 PPP1R3EQ9H7J1 279 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 DNMT3BQ9UBC3 853 aaKnown RBP8.07□□□□□ -1.12
VCL-206ENST00000623461 PRSS37A4D1T9 235 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 K7EQM0 130 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 ABCD4O14678 606 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms