RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 KCNS3Q9BQ31 491 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 TXNL4BQ9NX01 149 aaKnown RBP15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 CCDC59Q9P031 241 aaKnown RBP15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 NDRG3Q9UGV2 375 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 IGHV2OR16-5A0A0B4J2B6 119 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 TRBV5-5A0A0J9YX44 114 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 A0A1B0GTI1 187 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 NGFP01138 241 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 ZNF35P13682 527 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 GALP22466 123 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 SOX2P48431 317 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 NAAAQ02083 359 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 Q499Y3 187 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 MFSD4AQ8N468 514 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 OR13C3Q8NGS6 347 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 S100ZQ8WXG8 99 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 REEP6Q96HR9 211 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 FAM71F1Q96KD3 344 aaPredicted RBP15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 LYZL4Q96KX0 146 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 MMP27Q9H306 513 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 RNF167Q9H6Y7 350 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 TBCCD1Q9NVR7 557 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 DHDHQ9UQ10 334 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 STARD10Q9Y365 291 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 CADP27708 2225 aa15.4■□□□□ 0.06
PTCHD3-202ENST00000622555 MYO18BQ8IUG5 2567 aa15.39■□□□□ 0.05
PTCHD3-202ENST00000622555 ZNF879B4DU55 563 aa15.39■□□□□ 0.05
PTCHD3-202ENST00000622555 XRCC2O43543 280 aa15.39■□□□□ 0.05
PTCHD3-202ENST00000622555 SC5DO75845 299 aa15.39■□□□□ 0.05
PTCHD3-202ENST00000622555 GATBO75879 557 aaKnown RBP15.39■□□□□ 0.05
PTCHD3-202ENST00000622555 FAM157BP0CG42 384 aa15.39■□□□□ 0.05
PTCHD3-202ENST00000622555 CALCRP30988 508 aa15.39■□□□□ 0.05
PTCHD3-202ENST00000622555 FGF9P31371 208 aaPredicted RBP15.39■□□□□ 0.05
PTCHD3-202ENST00000622555 MALLQ13021 153 aa15.39■□□□□ 0.05
PTCHD3-202ENST00000622555 ZMAT1Q5H9K5 638 aa15.39■□□□□ 0.05
PTCHD3-202ENST00000622555 RFPL4BQ6ZWI9 263 aa15.39■□□□□ 0.05
PTCHD3-202ENST00000622555 DOK3Q7L591 496 aa15.39■□□□□ 0.05
PTCHD3-202ENST00000622555 LINC01560Q8TB33 94 aa15.39■□□□□ 0.05
PTCHD3-202ENST00000622555 SOX7Q9BT81 388 aa15.39■□□□□ 0.05
PTCHD3-202ENST00000622555 WDR12Q9GZL7 423 aaKnown RBP15.39■□□□□ 0.05
PTCHD3-202ENST00000622555 RGCCQ9H4X1 137 aa15.39■□□□□ 0.05
PTCHD3-202ENST00000622555 HMG20AQ9NP66 347 aa15.39■□□□□ 0.05
PTCHD3-202ENST00000622555 GSTK1Q9Y2Q3 226 aa15.39■□□□□ 0.05
PTCHD3-202ENST00000622555 A0A1W2PPK0 400 aa15.38■□□□□ 0.05
PTCHD3-202ENST00000622555 SMPD2O60906 423 aa15.38■□□□□ 0.05
PTCHD3-202ENST00000622555 IGLV3-1P01715 115 aa15.38■□□□□ 0.05
PTCHD3-202ENST00000622555 CRYAAP02489 173 aa15.38■□□□□ 0.05
PTCHD3-202ENST00000622555 CCL1P22362 96 aa15.38■□□□□ 0.05
PTCHD3-202ENST00000622555 MAPK3P27361 379 aaPredicted RBP15.38■□□□□ 0.05
PTCHD3-202ENST00000622555 FAM27D1Q5T7N8 215 aa15.38■□□□□ 0.05
PTCHD3-202ENST00000622555 PAMR1Q6UXH9 720 aa15.38■□□□□ 0.05
PTCHD3-202ENST00000622555 OR5L1Q8NGL2 311 aa15.38■□□□□ 0.05
PTCHD3-202ENST00000622555 AKAP1Q92667 903 aaKnown RBP eCLIP15.38■□□□□ 0.05
PTCHD3-202ENST00000622555 NGBQ9NPG2 151 aa15.38■□□□□ 0.05
PTCHD3-202ENST00000622555 PTTG3PQ9NZH4 202 aa15.38■□□□□ 0.05
PTCHD3-202ENST00000622555 ZNF391Q9UJN7 358 aa15.38■□□□□ 0.05
PTCHD3-202ENST00000622555 TUBAL3A6NHL2 446 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 J3QRK9 145 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 J3QW42 95 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 ICMTO60725 284 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 CD40P25942 277 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 UCP2P55851 309 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 ZNF92Q03936 586 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 ZNF404Q494X3 552 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 TMEM108Q6UXF1 575 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 UNQ9370/PRO34162Q6UXP9 181 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 MCFD2Q8NI22 146 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 TMEM106AQ96A25 262 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 KCTD7Q96MP8 289 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 DERL3Q96Q80 235 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 NPDC1Q9NQX5 325 aaPredicted RBP15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 ANKHD1Q8IWZ3 2542 aaKnown RBP15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 LMX1BO60663 402 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 CD2P06729 351 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 BMP4P12644 408 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 PTAFRP25105 342 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 PPP1CBP62140 327 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 C11orf91Q3C1V1 193 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 UNQ6126/PRO20091Q6UXV3 157 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 Q6ZNX1 250 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 THRSPQ92748 146 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 PPIL3Q9H2H8 161 aaKnown RBP15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 POFUT1Q9H488 388 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 NOX4Q9NPH5 578 aa15.37■□□□□ 0.05
PTCHD3-202ENST00000622555 MTRF1O75570 445 aaKnown RBP15.36■□□□□ 0.05
PTCHD3-202ENST00000622555 DHRS3O75911 302 aa15.36■□□□□ 0.05
PTCHD3-202ENST00000622555 ARL6IP5O75915 188 aa15.36■□□□□ 0.05
PTCHD3-202ENST00000622555 UCHL1P09936 223 aa15.36■□□□□ 0.05
PTCHD3-202ENST00000622555 ZNF12P17014 697 aa15.36■□□□□ 0.05
PTCHD3-202ENST00000622555 CFL1P23528 166 aaKnown RBP15.36■□□□□ 0.05
PTCHD3-202ENST00000622555 CALRP27797 417 aaKnown RBP15.36■□□□□ 0.05
PTCHD3-202ENST00000622555 RAD52P43351 418 aa15.36■□□□□ 0.05
PTCHD3-202ENST00000622555 PRSS12P56730 875 aa15.36■□□□□ 0.05
PTCHD3-202ENST00000622555 GK2Q14410 553 aaPredicted RBP15.36■□□□□ 0.05
PTCHD3-202ENST00000622555 HLXQ14774 488 aaPredicted RBP15.36■□□□□ 0.05
PTCHD3-202ENST00000622555 SPATA46Q5T0L3 261 aa15.36■□□□□ 0.05
PTCHD3-202ENST00000622555 MRPL21Q7Z2W9 205 aaKnown RBP15.36■□□□□ 0.05
PTCHD3-202ENST00000622555 PLPP7Q8NBV4 271 aa15.36■□□□□ 0.05
PTCHD3-202ENST00000622555 OR1J1Q8NGS3 322 aa15.36■□□□□ 0.05
PTCHD3-202ENST00000622555 PHYHIPQ92561 330 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms