RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 HCAR1Q9BXC0 346 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 MS4A7Q9GZW8 240 aaPredicted RBP9.51□□□□□ -0.89
CPNE3-210ENST00000621245 UNKLQ9H9P5 680 aaKnown RBP9.51□□□□□ -0.89
CPNE3-210ENST00000621245 KRCC1Q9NPI7 259 aaPredicted RBP9.51□□□□□ -0.89
CPNE3-210ENST00000621245 MED4Q9NPJ6 270 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 TNFRSF19Q9NS68 423 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 DUX4Q9UBX2 424 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 MIOXQ9UGB7 285 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 MAGEL2Q9UJ55 1249 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 LYVE1Q9Y5Y7 322 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 COMMD3-BMI1R4GMX3 469 aa9.51□□□□□ -0.89
CPNE3-210ENST00000621245 CD300LBA8K4G0 201 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 HOXA3O43365 443 aaPredicted RBP9.5□□□□□ -0.89
CPNE3-210ENST00000621245 EIF4EBP3O60516 100 aaPredicted RBP9.5□□□□□ -0.89
CPNE3-210ENST00000621245 SOX14O95416 240 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 NOS3P29474 1203 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 OTX1P32242 354 aaPredicted RBP9.5□□□□□ -0.89
CPNE3-210ENST00000621245 PSMB10P40306 273 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 CRMP1Q14194 572 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 HSP90B2PQ58FF3 399 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 RBMS3Q6XE24 437 aaKnown RBP9.5□□□□□ -0.89
CPNE3-210ENST00000621245 PGAP1Q75T13 922 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 SPATC1Q76KD6 591 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 DCXRQ7Z4W1 244 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 PGAM4Q8N0Y7 254 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 LNX2Q8N448 690 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 PROKR2Q8NFJ6 384 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 OR8B3Q8NGG8 313 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 OR2AJ1Q8NGZ0 328 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 SGMS2Q8NHU3 365 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 Q8TCH9 128 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 GNPDA2Q8TDQ7 276 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 OR8B2Q96RD0 313 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 TBX15Q96SF7 602 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 IL1RAPQ9NPH3 570 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 CDH10Q9Y6N8 788 aa9.5□□□□□ -0.89
CPNE3-210ENST00000621245 IGHV3OR15-7A0A075B7D8 119 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 KIR2DS1A0A191URI9 304 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 TCRBV5S2A0A599 114 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 IFNL4K9M1U5 179 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 TNFRSF13BO14836 293 aaPredicted RBP9.49□□□□□ -0.89
CPNE3-210ENST00000621245 GASTP01350 101 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 SPARCP09486 303 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 MMP9P14780 707 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 PRKXP51817 358 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 PRB3Q04118 309 aaPredicted RBP9.49□□□□□ -0.89
CPNE3-210ENST00000621245 OR8G1Q15617 311 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 SLC36A3Q495N2 470 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 SAMD4BQ5PRF9 694 aaKnown RBP9.49□□□□□ -0.89
CPNE3-210ENST00000621245 PRR31Q5SQ13 230 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 LRRN1Q6UXK5 716 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 DCDC5Q6ZRR9 648 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 MRPL21Q7Z2W9 205 aaKnown RBP9.49□□□□□ -0.89
CPNE3-210ENST00000621245 DEFB107AQ8IZN7 70 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 OR56B2PQ8NGI1 322 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 SPRYD4Q8WW59 207 aaPredicted RBP9.49□□□□□ -0.89
CPNE3-210ENST00000621245 TECTBQ96PL2 329 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 AMELYQ99218 206 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 MMADHCQ9H3L0 296 aaPredicted RBP9.49□□□□□ -0.89
CPNE3-210ENST00000621245 MED20Q9H944 212 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 MARCH7Q9H992 704 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 ARMC1Q9NVT9 282 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 CLN8Q9UBY8 286 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 N6AMT1Q9Y5N5 214 aa9.49□□□□□ -0.89
CPNE3-210ENST00000621245 SLC22A31A6NKX4 558 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 LRRC30A6NM36 301 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 GMNNO75496 209 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 PTBP3O95758 552 aaKnown RBP9.48□□□□□ -0.89
CPNE3-210ENST00000621245 GYPAP02724 150 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 TFF1P04155 84 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 PPIAL4GP0DN37 164 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 CFHR2P36980 270 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 DLX1P56177 255 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 TPTEP56180 551 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 SMIM11AP58511 58 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 FOXL1Q12952 345 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 ECH1Q13011 328 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 MALLQ13021 153 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 KLHL12Q53G59 568 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 BTNL3Q6UXE8 466 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 GCSAMQ8N6F7 178 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 AQP11Q8NBQ7 271 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 MCUR1Q96AQ8 359 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 SEH1LQ96EE3 360 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 PCGF1Q9BSM1 259 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 NMNAT2Q9BZQ4 307 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 NSRP1Q9H0G5 558 aaKnown RBP9.48□□□□□ -0.89
CPNE3-210ENST00000621245 TBC1D23Q9NUY8 699 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 C1orf123Q9NWV4 160 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 PFDN2Q9UHV9 154 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 TAGLN3Q9UI15 199 aa9.48□□□□□ -0.89
CPNE3-210ENST00000621245 CLDN34H7C241 214 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 TNFRSF11BO00300 401 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 PHYHO14832 338 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 ADAM20O43506 726 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 IDH3BO43837 385 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 FSTL3O95633 263 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 GRPP07492 148 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 VSIG8P0DPA2 414 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 IRF2P14316 349 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms