RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 KRT8P05787 483 aa13.85□□□□□ -0.19
CD40-207ENST00000620709 FAM157CP0CG43 387 aa13.85□□□□□ -0.19
CD40-207ENST00000620709 PSKH1P11801 424 aa13.85□□□□□ -0.19
CD40-207ENST00000620709 DAOP14920 347 aa13.85□□□□□ -0.19
CD40-207ENST00000620709 PPOXP50336 477 aa13.85□□□□□ -0.19
CD40-207ENST00000620709 VBP1P61758 197 aa13.85□□□□□ -0.19
CD40-207ENST00000620709 SPCS2Q15005 226 aa13.85□□□□□ -0.19
CD40-207ENST00000620709 PCK2Q16822 640 aa13.85□□□□□ -0.19
CD40-207ENST00000620709 ZNF684Q5T5D7 378 aa13.85□□□□□ -0.19
CD40-207ENST00000620709 LRFN4Q6PJG9 635 aa13.85□□□□□ -0.19
CD40-207ENST00000620709 IL17RDQ8NFM7 739 aa13.85□□□□□ -0.19
CD40-207ENST00000620709 SPATA3Q8NHX4 192 aa13.85□□□□□ -0.19
CD40-207ENST00000620709 C11orf40Q8WZ69 217 aa13.85□□□□□ -0.19
CD40-207ENST00000620709 PELI1Q96FA3 418 aa13.85□□□□□ -0.19
CD40-207ENST00000620709 TPK1Q9H3S4 243 aa13.85□□□□□ -0.19
CD40-207ENST00000620709 MYOZ1Q9NP98 299 aaPredicted RBP13.85□□□□□ -0.19
CD40-207ENST00000620709 ACOXLQ9NUZ1 547 aa13.85□□□□□ -0.19
CD40-207ENST00000620709 IKZF2Q9UKS7 526 aa13.85□□□□□ -0.19
CD40-207ENST00000620709 KCNS2Q9ULS6 477 aa13.85□□□□□ -0.19
CD40-207ENST00000620709 CMAHPQ9Y471 501 aa13.85□□□□□ -0.19
CD40-207ENST00000620709 METTL15A6NJ78 407 aa13.84□□□□□ -0.19
CD40-207ENST00000620709 VWC2LB2RUY7 222 aa13.84□□□□□ -0.19
CD40-207ENST00000620709 DHHO43323 396 aa13.84□□□□□ -0.19
CD40-207ENST00000620709 GUCA1AP43080 201 aaPredicted RBP13.84□□□□□ -0.19
CD40-207ENST00000620709 NCS1P62166 190 aa13.84□□□□□ -0.19
CD40-207ENST00000620709 RPS25P62851 125 aaKnown RBP13.84□□□□□ -0.19
CD40-207ENST00000620709 EIF2B1Q14232 305 aaKnown RBP13.84□□□□□ -0.19
CD40-207ENST00000620709 CCDC58Q4VC31 144 aa13.84□□□□□ -0.19
CD40-207ENST00000620709 FAM166AQ6J272 317 aa13.84□□□□□ -0.19
CD40-207ENST00000620709 KCTD18Q6PI47 426 aaPredicted RBP13.84□□□□□ -0.19
CD40-207ENST00000620709 OR8B4Q96RC9 309 aa13.84□□□□□ -0.19
CD40-207ENST00000620709 FOXB1Q99853 325 aa13.84□□□□□ -0.19
CD40-207ENST00000620709 DCUN1D5Q9BTE7 237 aa13.84□□□□□ -0.19
CD40-207ENST00000620709 BPESC1Q9GZL8 116 aa13.84□□□□□ -0.19
CD40-207ENST00000620709 EXOSC4Q9NPD3 245 aaKnown RBP13.84□□□□□ -0.19
CD40-207ENST00000620709 B3GNT2Q9NY97 397 aa13.84□□□□□ -0.19
CD40-207ENST00000620709 MRM2Q9UI43 246 aaKnown RBP13.84□□□□□ -0.19
CD40-207ENST00000620709 SSR3Q9UNL2 185 aa13.84□□□□□ -0.19
CD40-207ENST00000620709 POLR1DQ9Y2S0 133 aa13.84□□□□□ -0.19
CD40-207ENST00000620709 SF3B6Q9Y3B4 125 aaKnown RBP13.84□□□□□ -0.19
CD40-207ENST00000620709 SPEF1Q9Y4P9 236 aa13.84□□□□□ -0.19
CD40-207ENST00000620709 PRR32B1ATL7 298 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 E9PI62 339 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 MAGEB4O15481 346 aaPredicted RBP13.83□□□□□ -0.2
CD40-207ENST00000620709 PLPP2O43688 288 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 GPX5O75715 221 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 PATE4P0C8F1 98 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 OR8G3PP0DMU2 310 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 CRYBB2P43320 205 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 ZNF84P51523 738 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 RAB1AP62820 205 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 GALK2Q01415 458 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 KCNMB1Q16558 191 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 OTPQ5XKR4 325 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 DMKNQ6E0U4 476 aaPredicted RBP13.83□□□□□ -0.2
CD40-207ENST00000620709 RPL22L1Q6P5R6 122 aaKnown RBP13.83□□□□□ -0.2
CD40-207ENST00000620709 ARL9Q6T311 187 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 FOXL2NBQ6ZUU3 175 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 USP43Q70EL4 1123 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 YIPF7Q8N8F6 280 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 NEU4Q8WWR8 484 aaPredicted RBP13.83□□□□□ -0.2
CD40-207ENST00000620709 TSC22D3Q99576 134 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 COQ7Q99807 217 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 ABHD6Q9BV23 337 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 CDADC1Q9BWV3 514 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 POLE4Q9NR33 117 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 LPAR3Q9UBY5 353 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 FBXO9Q9UK97 447 aaPredicted RBP13.83□□□□□ -0.2
CD40-207ENST00000620709 FZR1Q9UM11 496 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 GRIP1Q9Y3R0 1128 aa13.83□□□□□ -0.2
CD40-207ENST00000620709 SIRT4Q9Y6E7 314 aaPredicted RBP13.83□□□□□ -0.2
CD40-207ENST00000620709 MALRD1Q5VYJ5 2156 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 LRP5LA4QPB2 252 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 PSMD9O00233 223 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 OGG1O15527 345 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 PHF1O43189 567 aaPredicted RBP13.82□□□□□ -0.2
CD40-207ENST00000620709 ABHD16AO95870 558 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 TGFAP01135 160 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 HLA-DPB1P04440 258 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 CDAP32320 146 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 TGM4P49221 684 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 ROM1Q03395 351 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 CDK5R1Q15078 307 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 TRAM1Q15629 374 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 ZNF679Q8IYX0 411 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 NDNFQ8TB73 568 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 TMEM203Q969S6 136 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 MSI2Q96DH6 328 aaKnown RBP13.82□□□□□ -0.2
CD40-207ENST00000620709 SMIM19Q96E16 107 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 AMELYQ99218 206 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 SYT3Q9BQG1 590 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 CENPOQ9BU64 300 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 MROQ9BYG7 248 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 UGT2A1Q9Y4X1 527 aa13.82□□□□□ -0.2
CD40-207ENST00000620709 LYNX1G3V0Z9 82 aa13.81□□□□□ -0.2
CD40-207ENST00000620709 UBL3O95164 117 aa13.81□□□□□ -0.2
CD40-207ENST00000620709 CD1AP06126 327 aa13.81□□□□□ -0.2
CD40-207ENST00000620709 LYNX1P0DP58 116 aa13.81□□□□□ -0.2
CD40-207ENST00000620709 ZNF182P17025 639 aaPredicted RBP13.81□□□□□ -0.2
CD40-207ENST00000620709 MSR1P21757 451 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms