RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 VDAC3Q9Y277 283 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 WSB1Q9Y6I7 421 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 MARCH11A6NNE9 402 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 SLC25A6P12236 298 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 GPX2P18283 190 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 EMDP50402 254 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 DUSP28Q4G0W2 176 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM244Q5VVB8 128 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 SLCO4C1Q6ZQN7 724 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 RNF165Q6ZSG1 346 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 CCDC71LQ8N9Z2 235 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 MYEOVQ96EZ4 313 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 CALHM2Q9HA72 323 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 SPAG17Q6Q759 2223 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 M0R1X1 148 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 HS3ST1O14792 307 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 COX5BP10606 129 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 WNT5AP41221 380 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 CCL14Q16627 93 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 TMPRSS11FQ6ZWK6 438 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 MUC15Q8N387 334 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 DAZAP1Q96EP5 407 aaKnown RBP4.55□□□□□ -1.68
VPS13D-214ENST00000620676 FZD6O60353 706 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 CIDEAO60543 219 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 OR4A8P0C604 315 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 RRADP55042 308 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 CLEC1AQ8NC01 280 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 VN1R3Q9BXE9 311 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 NSG1A0A0A6YYJ2 146 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 BMPR1BO00238 502 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 TRAF3IP2O43734 574 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-214ENST00000620676 TK1P04183 234 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 DRD2P14416 443 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 VWA2Q5GFL6 755 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 PRAMEF8Q5VWM4 474 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 PRAMEF7Q5VXH5 474 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF738Q8NE65 137 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 SLC17A9Q9BYT1 436 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF286AQ9HBT8 521 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 RASL12Q9NYN1 266 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 MEGF11A6BM72 1044 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF729A6NN14 1252 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-214ENST00000620676 HMSDA8MTL9 139 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 CST4P01036 141 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 IGHEP01854 428 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 DUSP1P28562 367 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 ERVFC1-1P60608 527 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 DHRS7BQ6IAN0 325 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-214ENST00000620676 Q7L0L9 218 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 OR2AE1Q8NHA4 323 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 MRPS2Q9Y399 296 aaKnown RBP4.55□□□□□ -1.68
VPS13D-214ENST00000620676 LAMA4Q16363 1823 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM189-UBE2V1I3L0A0 370 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 DDAH2O95865 285 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 PGA3P0DJD8 388 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 NOVA1P51513 510 aaKnown RBP4.55□□□□□ -1.68
VPS13D-214ENST00000620676 OR51E1Q8TCB6 317 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 ISG20Q96AZ6 181 aaKnown RBP4.55□□□□□ -1.68
VPS13D-214ENST00000620676 ZC3HAV1LQ96H79 300 aaKnown RBP4.55□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM38AQ9H6F2 299 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 NPFFR2Q9Y5X5 522 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 TCRBV21S2A2A0A5A6 115 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 SIRPB1O00241 398 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 SFTPCP11686 197 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 TIMP2P16035 220 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 ACTR1BP42025 376 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 PRSS12P56730 875 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 ACTR1AP61163 376 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 CDPF1Q6NVV7 123 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 BTNL8Q6UX41 500 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 WFDC8Q8IUA0 241 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 SMIM19Q96E16 107 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 SLC25A22Q9H936 323 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 PRTFDC1Q9NRG1 225 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 ALOX12BO75342 701 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 AGR2O95994 175 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 FKBP1BP68106 108 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 NTHL1P78549 312 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 HLA-DRB3P79483 266 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 PPP1R3EQ9H7J1 279 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 DOK5Q9P104 306 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 F11RQ9Y624 299 aaKnown RBP4.55□□□□□ -1.68
VPS13D-214ENST00000620676 ARPC3O15145 178 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF93P35789 620 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-214ENST00000620676 PRAMEF20Q5VT98 475 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 DHRS13Q6UX07 377 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 ADPRHL1Q8NDY3 354 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 TSLPQ969D9 159 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 NRIP2Q9BQI9 281 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 RALYQ9UKM9 306 aaKnown RBP4.55□□□□□ -1.68
VPS13D-214ENST00000620676 H0YL77 283 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 CDX1P47902 265 aaPredicted RBP4.55□□□□□ -1.68
VPS13D-214ENST00000620676 C22orf15Q8WYQ4 148 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 PINX1Q96BK5 328 aaKnown RBP4.55□□□□□ -1.68
VPS13D-214ENST00000620676 MOGAT1Q96PD6 335 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 PRSS50Q9UI38 385 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 LOC102723971A0A1B0GUV8 181 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 HHLA1C9JL84 531 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 PRNPP04156 253 aa4.55□□□□□ -1.68
VPS13D-214ENST00000620676 RAC2P15153 192 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms