RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 CNEP1R1Q8N9A8 125 aa18.88■□□□□ 0.61
SGMS1-210ENST00000619438 RELL2Q8NC24 303 aaPredicted RBP18.88■□□□□ 0.61
SGMS1-210ENST00000619438 OR2V1Q8NHB1 315 aa18.88■□□□□ 0.61
SGMS1-210ENST00000619438 SLC25A44Q96H78 314 aaPredicted RBP18.88■□□□□ 0.61
SGMS1-210ENST00000619438 OXGR1Q96P68 337 aa18.88■□□□□ 0.61
SGMS1-210ENST00000619438 MCTS1Q9ULC4 181 aaKnown RBP18.88■□□□□ 0.61
SGMS1-210ENST00000619438 ZNF175Q9Y473 711 aa18.88■□□□□ 0.61
SGMS1-210ENST00000619438 PKDREJQ9NTG1 2253 aa18.87■□□□□ 0.61
SGMS1-210ENST00000619438 ABCA12Q86UK0 2595 aa18.87■□□□□ 0.61
SGMS1-210ENST00000619438 TRAF3IP2O43734 574 aaPredicted RBP18.87■□□□□ 0.61
SGMS1-210ENST00000619438 CXCL13O43927 109 aa18.87■□□□□ 0.61
SGMS1-210ENST00000619438 WNT11O96014 354 aa18.87■□□□□ 0.61
SGMS1-210ENST00000619438 CD2P06729 351 aa18.87■□□□□ 0.61
SGMS1-210ENST00000619438 ACHEP22303 614 aa18.87■□□□□ 0.61
SGMS1-210ENST00000619438 SRP9P49458 86 aaKnown RBP18.87■□□□□ 0.61
SGMS1-210ENST00000619438 ASCL1P50553 236 aa18.87■□□□□ 0.61
SGMS1-210ENST00000619438 CLDN12P56749 244 aa18.87■□□□□ 0.61
SGMS1-210ENST00000619438 ZNF704Q6ZNC4 412 aaPredicted RBP18.87■□□□□ 0.61
SGMS1-210ENST00000619438 NOXO1Q8NFA2 376 aa18.87■□□□□ 0.61
SGMS1-210ENST00000619438 OR6X1Q8NH79 312 aa18.87■□□□□ 0.61
SGMS1-210ENST00000619438 FAM210AQ96ND0 272 aa18.87■□□□□ 0.61
SGMS1-210ENST00000619438 OR5B2Q96R09 309 aa18.87■□□□□ 0.61
SGMS1-210ENST00000619438 G6PC2Q9NQR9 355 aa18.87■□□□□ 0.61
SGMS1-210ENST00000619438 DHDHQ9UQ10 334 aa18.87■□□□□ 0.61
SGMS1-210ENST00000619438 HCFC1P51610 2035 aa18.87■□□□□ 0.61
SGMS1-210ENST00000619438 KIAA1549Q9HCM3 1950 aa18.87■□□□□ 0.61
SGMS1-210ENST00000619438 FBN2P35556 2912 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 A0A0J9YW62 118 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 C7orf66A4D0T2 115 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 AQP7P3A6NL99 342 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 DHFRP00374 187 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 IGHG1P01857 330 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 MAS1P04201 325 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 PGA4P0DJD7 388 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 PGA3P0DJD8 388 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 FCGR2AP12318 317 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 LAP3P28838 519 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 GDNFP39905 211 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 MMP16P51512 607 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 NKX2-5P52952 324 aaPredicted RBP18.86■□□□□ 0.61
SGMS1-210ENST00000619438 RAB25P57735 213 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 AP3S2P59780 193 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 RRAS2P62070 204 aaPredicted RBP18.86■□□□□ 0.61
SGMS1-210ENST00000619438 SLC35A1P78382 337 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 FAM166AQ6J272 317 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 LINGO2Q7L985 606 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 PRSS45Q7RTY3 260 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 SLC17A5Q9NRA2 495 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 DDX28Q9NUL7 540 aaKnown RBP18.86■□□□□ 0.61
SGMS1-210ENST00000619438 CYB5R1Q9UHQ9 305 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 HHLA2Q9UM44 414 aa18.86■□□□□ 0.61
SGMS1-210ENST00000619438 SLC17A2O00624 439 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 ATP6V1G1O75348 118 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 KRT33AO76009 404 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 PMS2P2O95744 297 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 TCRBP04435 133 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 CRHP06850 196 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 IGFBP3P17936 291 aaPredicted RBP18.85■□□□□ 0.61
SGMS1-210ENST00000619438 TMEM69Q5SWH9 247 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 RHOUQ7L0Q8 258 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 LUZP2Q86TE4 346 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 DNAAF1Q8NEP3 725 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 C11orf40Q8WZ69 217 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 RANGRFQ9HD47 186 aaPredicted RBP18.85■□□□□ 0.61
SGMS1-210ENST00000619438 OR52A1Q9UKL2 312 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 NAP1L6A6NFF2 107 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 UBCP0CG48 685 aaKnown RBP18.85■□□□□ 0.61
SGMS1-210ENST00000619438 SNTB2Q13425 540 aaKnown RBP18.85■□□□□ 0.61
SGMS1-210ENST00000619438 HIST3H3Q16695 136 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 ODF4Q2M2E3 257 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 TMEM244Q5VVB8 128 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 TMEM225Q6GV28 225 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 ASPHD2Q6ICH7 369 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 TMPPEQ6ZT21 453 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 IZUMO1Q8IYV9 350 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 OR10H5Q8NGA6 315 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 FCAMRQ8WWV6 532 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 DEDD2Q8WXF8 326 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 AKAP1Q92667 903 aaKnown RBP eCLIP18.85■□□□□ 0.61
SGMS1-210ENST00000619438 RNASE6Q93091 150 aaKnown RBP18.85■□□□□ 0.61
SGMS1-210ENST00000619438 RNF170Q96K19 258 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 ADGRG7Q96K78 797 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 EMC6Q9BV81 110 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 CACNG6Q9BXT2 260 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 AUNIPQ9H7T9 357 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 RNF122Q9H9V4 155 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 CKLFQ9UBR5 152 aa18.85■□□□□ 0.61
SGMS1-210ENST00000619438 FOXD3Q9UJU5 478 aaPredicted RBP18.85■□□□□ 0.61
SGMS1-210ENST00000619438 A0A1W2PNR3 127 aa18.84■□□□□ 0.61
SGMS1-210ENST00000619438 MEGF11A6BM72 1044 aa18.84■□□□□ 0.61
SGMS1-210ENST00000619438 PRF1P14222 555 aa18.84■□□□□ 0.61
SGMS1-210ENST00000619438 CDK2P24941 298 aa18.84■□□□□ 0.61
SGMS1-210ENST00000619438 CLRN1P58418 232 aa18.84■□□□□ 0.61
SGMS1-210ENST00000619438 KCNMB1Q16558 191 aa18.84■□□□□ 0.61
SGMS1-210ENST00000619438 ANKRD16Q6P6B7 361 aa18.84■□□□□ 0.61
SGMS1-210ENST00000619438 SLC25A47Q6Q0C1 308 aa18.84■□□□□ 0.61
SGMS1-210ENST00000619438 DMRTC2Q8IXT2 367 aaPredicted RBP18.84■□□□□ 0.61
SGMS1-210ENST00000619438 OR52I2Q8NH67 350 aa18.84■□□□□ 0.61
SGMS1-210ENST00000619438 ACTR6Q9GZN1 396 aa18.84■□□□□ 0.61
SGMS1-210ENST00000619438 PIGMQ9H3S5 423 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms