RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 FAAP20Q6NZ36 180 aa15.39■□□□□ 0.05
CNOT3-209ENST00000617930 ANKRD16Q6P6B7 361 aa15.39■□□□□ 0.05
CNOT3-209ENST00000617930 KLHL24Q6TFL4 600 aa15.39■□□□□ 0.05
CNOT3-209ENST00000617930 ZNF813Q6ZN06 617 aa15.39■□□□□ 0.05
CNOT3-209ENST00000617930 RHOUQ7L0Q8 258 aa15.39■□□□□ 0.05
CNOT3-209ENST00000617930 LRRC18Q8N456 261 aa15.39■□□□□ 0.05
CNOT3-209ENST00000617930 MEIOBQ8N635 442 aa15.39■□□□□ 0.05
CNOT3-209ENST00000617930 OR2V1Q8NHB1 315 aa15.39■□□□□ 0.05
CNOT3-209ENST00000617930 THRSPQ92748 146 aa15.39■□□□□ 0.05
CNOT3-209ENST00000617930 RBM24Q9BX46 236 aaKnown RBP15.39■□□□□ 0.05
CNOT3-209ENST00000617930 ZNF552Q9H707 407 aaPredicted RBP15.39■□□□□ 0.05
CNOT3-209ENST00000617930 ZNF703Q9H7S9 590 aaPredicted RBP15.39■□□□□ 0.05
CNOT3-209ENST00000617930 WASF3Q9UPY6 502 aa15.39■□□□□ 0.05
CNOT3-209ENST00000617930 OR5H15A6NDH6 313 aa15.39■□□□□ 0.05
CNOT3-209ENST00000617930 ICMTO60725 284 aa15.39■□□□□ 0.05
CNOT3-209ENST00000617930 MNDAP41218 407 aa15.39■□□□□ 0.05
CNOT3-209ENST00000617930 LSM6P62312 80 aaKnown RBP15.39■□□□□ 0.05
CNOT3-209ENST00000617930 RAB11BQ15907 218 aa15.39■□□□□ 0.05
CNOT3-209ENST00000617930 LINC00303Q3SY05 128 aa15.39■□□□□ 0.05
CNOT3-209ENST00000617930 GLDNQ6ZMI3 551 aaPredicted RBP15.39■□□□□ 0.05
CNOT3-209ENST00000617930 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.39■□□□□ 0.05
CNOT3-209ENST00000617930 OR4D6Q8NGJ1 314 aa15.39■□□□□ 0.05
CNOT3-209ENST00000617930 RADILQ96JH8 1075 aa15.39■□□□□ 0.05
CNOT3-209ENST00000617930 UTP23Q9BRU9 249 aaKnown RBP15.39■□□□□ 0.05
CNOT3-209ENST00000617930 SF3B5Q9BWJ5 86 aaKnown RBP15.39■□□□□ 0.05
CNOT3-209ENST00000617930 NELFAQ9H3P2 528 aa15.39■□□□□ 0.05
CNOT3-209ENST00000617930 GPN1Q9HCN4 374 aaPredicted RBP15.39■□□□□ 0.05
CNOT3-209ENST00000617930 MYEF2Q9P2K5 600 aaKnown RBP15.39■□□□□ 0.05
CNOT3-209ENST00000617930 DMXL2Q8TDJ6 3036 aa15.39■□□□□ 0.05
CNOT3-209ENST00000617930 LOC390937A0A1W2PQ73 354 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 XRCC3O43542 346 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 DNPH1O43598 174 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 MSR1P21757 451 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 SCAND1P57086 179 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 HIST1H3AP68431 136 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 FOXC1Q12948 553 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 HIST2H3PS2Q5TEC6 136 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 ABLIM2Q6H8Q1 611 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 OR10K2Q6IF99 312 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 ZNF529Q6P280 563 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 HIST2H3AQ71DI3 136 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 FBXO17Q96EF6 278 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 FAM173AQ9BQD7 235 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 SLC5A6Q9Y289 635 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 MGAQ8IWI9 3026 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 NCOA6Q14686 2063 aaPredicted RBP15.38■□□□□ 0.05
CNOT3-209ENST00000617930 CEP295Q9C0D2 2601 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 LOC100289279A0A1B0GTE1 492 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 LDLRAD4O15165 306 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 SYT7O43581 403 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 CREBL2O60519 120 aaPredicted RBP15.38■□□□□ 0.05
CNOT3-209ENST00000617930 ABOP16442 354 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 POU3F2P20265 443 aaPredicted RBP15.38■□□□□ 0.05
CNOT3-209ENST00000617930 HTR2CP28335 458 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 HSD11B1P28845 292 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 CX3CR1P49238 355 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 AP2S1P53680 142 aaPredicted RBP15.38■□□□□ 0.05
CNOT3-209ENST00000617930 MDS2Q8NDY4 140 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 OR52N4Q8NGI2 321 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 ABHD3Q8WU67 409 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 CKLFQ9UBR5 152 aa15.38■□□□□ 0.05
CNOT3-209ENST00000617930 KIAA1549Q9HCM3 1950 aa15.37■□□□□ 0.05
CNOT3-209ENST00000617930 FAM166BA8MTA8 275 aa15.37■□□□□ 0.05
CNOT3-209ENST00000617930 M0R233 179 aa15.37■□□□□ 0.05
CNOT3-209ENST00000617930 MPC2O95563 127 aa15.37■□□□□ 0.05
CNOT3-209ENST00000617930 FAUP35544 74 aaKnown RBP15.37■□□□□ 0.05
CNOT3-209ENST00000617930 MAGEA5P43359 124 aa15.37■□□□□ 0.05
CNOT3-209ENST00000617930 LHX2P50458 406 aa15.37■□□□□ 0.05
CNOT3-209ENST00000617930 SOX8P57073 446 aa15.37■□□□□ 0.05
CNOT3-209ENST00000617930 GLT8D1Q68CQ7 371 aa15.37■□□□□ 0.05
CNOT3-209ENST00000617930 TTTY12Q9BZ98 90 aa15.37■□□□□ 0.05
CNOT3-209ENST00000617930 ULBP2Q9BZM5 246 aa15.37■□□□□ 0.05
CNOT3-209ENST00000617930 NPDC1Q9NQX5 325 aaPredicted RBP15.37■□□□□ 0.05
CNOT3-209ENST00000617930 AUP1Q9Y679 476 aa15.37■□□□□ 0.05
CNOT3-209ENST00000617930 GGT3PA6NGU5 568 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 G3V3Q6 166 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 HPNP05981 417 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 DBHP09172 617 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 ANXA7P20073 488 aaKnown RBP15.36■□□□□ 0.05
CNOT3-209ENST00000617930 C4BPBP20851 252 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 CTSSP25774 331 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 RAB14P61106 215 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 C1orf100Q5SVJ3 147 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 SEZ6L2Q6UXD5 910 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 RFPL4BQ6ZWI9 263 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 COMMD7Q86VX2 200 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 FDCSPQ8NFU4 85 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 LYZL4Q96KX0 146 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 CNTD2Q9H8S5 307 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 GPR84Q9NQS5 396 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 BOKQ9UMX3 212 aaPredicted RBP15.36■□□□□ 0.05
CNOT3-209ENST00000617930 MAB21L2Q9Y586 359 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 APC2O95996 2303 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 SPTBN4Q9H254 2564 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 WIPF3A6NGB9 483 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 NDUFB6O95139 128 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 ALDOBP05062 364 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 ITGB2P05107 769 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 CPN1P15169 458 aa15.36■□□□□ 0.05
CNOT3-209ENST00000617930 CLDN18P56856 261 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms