RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 ALDOBP05062 364 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 ERCC1P07992 297 aaPredicted RBP15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 CD83Q01151 205 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 HGFACQ04756 655 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 PMPCAQ10713 525 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 BCL2A1Q16548 175 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 MOGAT2Q3SYC2 334 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 NCCRP1Q6ZVX7 275 aaPredicted RBP15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 SLC16A14Q7RTX9 510 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 OR1F12Q8NHA8 337 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 COPZ2Q9P299 210 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 MTFP1Q9UDX5 166 aa15.18■□□□□ 0.02
PCDHGC3-205ENST00000617641 A0A0A6YYJ9 748 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 RBBP9O75884 186 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 DHFRP00374 187 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 APOC1P02654 83 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 CEACAM1P13688 526 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 PSG4Q00888 419 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 UNC119Q13432 240 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 BTN2A1Q7KYR7 527 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 PAQR4Q8N4S7 273 aaPredicted RBP15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 ACBD4Q8NC06 268 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 FAM46BQ96A09 425 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 RNF170Q96K19 258 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 FYTTD1Q96QD9 318 aaKnown RBP15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 LRFN3Q9BTN0 628 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 MCUBQ9NWR8 336 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 IGKV1-9A0A0C4DH69 117 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 ACTL6AO96019 429 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 FCER2P06734 321 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 HCKP08631 526 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 PRSS3P35030 304 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 PCGF3Q3KNV8 242 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 C9orf135Q5VTT2 229 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 OLFML2AQ68BL7 652 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 AWAT2Q6E213 333 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 OR2H1Q9GZK4 316 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 WNT5BQ9H1J7 359 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 SPRR3Q9UBC9 169 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 V9GYS6 101 aa15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 ZFHX2Q9C0A1 2572 aaPredicted RBP15.17■□□□□ 0.02
PCDHGC3-205ENST00000617641 OR6C6A6NF89 314 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 TM4SF5O14894 197 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 DHRS3O75911 302 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 BPNT1O95861 308 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 H2AFB2P0C5Z0 115 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 VSIG8P0DPA2 414 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 FAHP16930 419 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 RAB6AP20340 208 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 HTR5AP47898 357 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 RRAS2P62070 204 aaPredicted RBP15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 QRFPP83859 136 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 ANGPTL5Q86XS5 388 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 PTX4Q96A99 478 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 LINC00470Q9BZP3 86 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 ZMAT3Q9HA38 289 aaKnown RBP15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 PARPBPQ9NWS1 579 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 NKIRAS2Q9NYR9 191 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 RAB22AQ9UL26 194 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 TIMM10BQ9Y5J6 103 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 TRGV5A0A0B4J1U4 118 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 NAP1L6A6NFF2 107 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 CAPZA1P52907 286 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 ECH1Q13011 328 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 KCNJ8Q15842 424 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 DRAM2Q6UX65 266 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 C20orf85Q9H1P6 137 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 OR10A2Q9H208 303 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 BCO1Q9HAY6 547 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 NEK6Q9HC98 313 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 DLL3Q9NYJ7 618 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 ELF5Q9UKW6 265 aaPredicted RBP15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 FLVCR2Q9UPI3 526 aa15.16■□□□□ 0.02
PCDHGC3-205ENST00000617641 OR3A4PP47883 348 aa15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 FOXG1P55316 489 aaPredicted RBP15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 ARF1P84077 181 aaKnown RBP15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 CHMP1BQ7LBR1 199 aa15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 OR2AE1Q8NHA4 323 aa15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 NPRL2Q8WTW4 380 aa15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 AKAP1Q92667 903 aaKnown RBP eCLIP15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 SGK3Q96BR1 496 aa15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 PRRX2Q99811 253 aa15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 ZDHHC11Q9H8X9 412 aa15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 PIGLQ9Y2B2 252 aa15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 FREM1Q5H8C1 2179 aa15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 RIF1Q5UIP0 2472 aaKnown RBP15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 THBS4P35443 961 aa15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 PCBD1P61457 104 aa15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 ZFP69Q49AA0 526 aa15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 OR52H1Q8NGJ2 320 aa15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 GPX8Q8TED1 209 aa15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 CMBLQ96DG6 245 aa15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 WDYHV1Q96HA8 205 aa15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 TP63Q9H3D4 680 aaPredicted RBP15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 BEX1Q9HBH7 125 aa15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 MRPS28Q9Y2Q9 187 aaKnown RBP15.15■□□□□ 0.02
PCDHGC3-205ENST00000617641 ZFHX4Q86UP3 3567 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 CFAP47Q6ZTR5 3102 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 C7orf66A4D0T2 115 aa15.14■□□□□ 0.01
PCDHGC3-205ENST00000617641 WIPF3A6NGB9 483 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms