RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 GUCA2AQ02747 115 aa9.28□□□□□ -0.92
CUL4A-212ENST00000617546 ELAVL1Q15717 326 aaKnown RBP9.28□□□□□ -0.92
CUL4A-212ENST00000617546 Q6ZNB5 142 aa9.28□□□□□ -0.92
CUL4A-212ENST00000617546 INTS12Q96CB8 462 aaKnown RBP9.28□□□□□ -0.92
CUL4A-212ENST00000617546 CTSFQ9UBX1 484 aa9.28□□□□□ -0.92
CUL4A-212ENST00000617546 CA14Q9ULX7 337 aa9.28□□□□□ -0.92
CUL4A-212ENST00000617546 YTHDF2Q9Y5A9 579 aaKnown RBP9.28□□□□□ -0.92
CUL4A-212ENST00000617546 SLC24A4Q8NFF2 622 aa9.28□□□□□ -0.92
CUL4A-212ENST00000617546 STRADBQ9C0K7 418 aa9.28□□□□□ -0.92
CUL4A-212ENST00000617546 IL23AQ9NPF7 189 aa9.28□□□□□ -0.92
CUL4A-212ENST00000617546 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.28□□□□□ -0.92
CUL4A-212ENST00000617546 TNFSF12O43508 249 aa9.28□□□□□ -0.92
CUL4A-212ENST00000617546 SSSCA1O60232 199 aa9.28□□□□□ -0.92
CUL4A-212ENST00000617546 CSRP3P50461 194 aa9.28□□□□□ -0.92
CUL4A-212ENST00000617546 VAMP3Q15836 100 aa9.28□□□□□ -0.92
CUL4A-212ENST00000617546 TMEM241Q24JQ0 296 aa9.28□□□□□ -0.92
CUL4A-212ENST00000617546 NHLRC3Q5JS37 347 aa9.28□□□□□ -0.92
CUL4A-212ENST00000617546 OR2A2Q6IF42 318 aa9.28□□□□□ -0.92
CUL4A-212ENST00000617546 TMEM123Q8N131 208 aa9.28□□□□□ -0.92
CUL4A-212ENST00000617546 OR10P1Q8NGE3 313 aa9.28□□□□□ -0.92
CUL4A-212ENST00000617546 CNRIP1Q96F85 164 aaPredicted RBP9.28□□□□□ -0.92
CUL4A-212ENST00000617546 RAB40CQ96S21 281 aa9.28□□□□□ -0.92
CUL4A-212ENST00000617546 PARP12Q9H0J9 701 aaKnown RBP9.28□□□□□ -0.92
CUL4A-212ENST00000617546 ZDHHC11Q9H8X9 412 aa9.28□□□□□ -0.92
CUL4A-212ENST00000617546 DNMT3BQ9UBC3 853 aaKnown RBP9.28□□□□□ -0.92
CUL4A-212ENST00000617546 HPXP02790 462 aa9.27□□□□□ -0.92
CUL4A-212ENST00000617546 SEC11BP0C7V7 166 aa9.27□□□□□ -0.92
CUL4A-212ENST00000617546 CD96P40200 585 aa9.27□□□□□ -0.92
CUL4A-212ENST00000617546 DLK1P80370 383 aa9.27□□□□□ -0.92
CUL4A-212ENST00000617546 B4GALNT1Q00973 533 aa9.27□□□□□ -0.92
CUL4A-212ENST00000617546 C1orf61Q13536 156 aa9.27□□□□□ -0.92
CUL4A-212ENST00000617546 CPEB2Q7Z5Q1 589 aaKnown RBP9.27□□□□□ -0.92
CUL4A-212ENST00000617546 OR4C5Q8NGB2 326 aa9.27□□□□□ -0.92
CUL4A-212ENST00000617546 THAP10Q9P2Z0 257 aaPredicted RBP9.27□□□□□ -0.92
CUL4A-212ENST00000617546 PCDHGA9Q9Y5G4 932 aaKnown RBP9.27□□□□□ -0.92
CUL4A-212ENST00000617546 TCRBV16S1A1N1A0A5B0 115 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 IGHEP01854 428 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 HIST1H1DP16402 221 aaKnown RBP9.27□□□□□ -0.93
CUL4A-212ENST00000617546 TIGITQ495A1 244 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 DRAM2Q6UX65 266 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 ZNF66Q6ZN08 573 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 BHLHA9Q7RTU4 235 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 THNSL2Q86YJ6 484 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 OR4S1Q8NGB4 309 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 OR4N2Q8NGD1 307 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 OR51E1Q8TCB6 317 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 GPR87Q9BY21 358 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 GPR173Q9NS66 373 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 DMRT1Q9Y5R6 373 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 C7orf77A4D0Y5 90 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 RBFOX3A6NFN3 312 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 ZFPL1O95159 310 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 CD200P41217 278 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 TGFBR3Q03167 851 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 ZNF92Q03936 586 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 COL19A1Q14993 1142 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 ZNF528Q3MIS6 628 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 TMEM30AQ9NV96 361 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 FBXO4Q9UKT5 387 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 TRAPPC1Q9Y5R8 145 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 A0A1W2PPH5 198 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 ZNF320A2RRD8 509 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 XKRY2A2RUG3 117 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 NKX2-2O95096 273 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 FGF2P09038 288 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 TIAL1Q01085 375 aaKnown RBP eCLIP9.27□□□□□ -0.93
CUL4A-212ENST00000617546 CA13Q8N1Q1 262 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 ZNF845Q96IR2 970 aaPredicted RBP9.27□□□□□ -0.93
CUL4A-212ENST00000617546 TM7SF3Q9NS93 570 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 STARD5Q9NSY2 213 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 ZNF391Q9UJN7 358 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 HS3ST3A1Q9Y663 406 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 TRBV11-1A0A0K0K1C0 115 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 RD3LP0DJH9 198 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 GALR1P47211 349 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 NSUN5P2Q63ZY6 315 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 JMJD6Q6NYC1 403 aaPredicted RBP9.27□□□□□ -0.93
CUL4A-212ENST00000617546 LCN15Q6UWW0 184 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 DMBX1Q8NFW5 382 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 WFDC5Q8TCV5 224 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 ORAI1Q96D31 301 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 MRGPRX3Q96LB0 322 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 SOX7Q9BT81 388 aa9.27□□□□□ -0.93
CUL4A-212ENST00000617546 H3BNC9 293 aa9.26□□□□□ -0.93
CUL4A-212ENST00000617546 HPP00738 406 aa9.26□□□□□ -0.93
CUL4A-212ENST00000617546 CTSDP07339 412 aaPredicted RBP9.26□□□□□ -0.93
CUL4A-212ENST00000617546 TCN2P20062 427 aa9.26□□□□□ -0.93
CUL4A-212ENST00000617546 GCH1P30793 250 aa9.26□□□□□ -0.93
CUL4A-212ENST00000617546 FOXO1Q12778 655 aa9.26□□□□□ -0.93
CUL4A-212ENST00000617546 CBLN2Q8IUK8 224 aa9.26□□□□□ -0.93
CUL4A-212ENST00000617546 SUMF1Q8NBK3 374 aa9.26□□□□□ -0.93
CUL4A-212ENST00000617546 SPSB1Q96BD6 273 aa9.26□□□□□ -0.93
CUL4A-212ENST00000617546 MFRPQ9BY79 579 aa9.26□□□□□ -0.93
CUL4A-212ENST00000617546 PSENENQ9NZ42 101 aa9.26□□□□□ -0.93
CUL4A-212ENST00000617546 MED16Q9Y2X0 877 aa9.26□□□□□ -0.93
CUL4A-212ENST00000617546 FOCADQ5VW36 1801 aa9.26□□□□□ -0.93
CUL4A-212ENST00000617546 FRG2CA6NGY1 282 aa9.26□□□□□ -0.93
CUL4A-212ENST00000617546 H0YIG0 161 aa9.26□□□□□ -0.93
CUL4A-212ENST00000617546 XRCC2O43543 280 aa9.26□□□□□ -0.93
CUL4A-212ENST00000617546 RPLP1P05386 114 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms