RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 RAD52P43351 418 aa12.74□□□□□ -0.37
UBXN1-218ENST00000616865 PDLIM4P50479 330 aa12.74□□□□□ -0.37
UBXN1-218ENST00000616865 GBX2P52951 348 aaPredicted RBP12.74□□□□□ -0.37
UBXN1-218ENST00000616865 SLC35A2P78381 396 aa12.74□□□□□ -0.37
UBXN1-218ENST00000616865 SRSF2Q01130 221 aaKnown RBP12.74□□□□□ -0.37
UBXN1-218ENST00000616865 CDONQ4KMG0 1287 aa12.74□□□□□ -0.37
UBXN1-218ENST00000616865 IL17RELQ6ZVW7 336 aa12.74□□□□□ -0.37
UBXN1-218ENST00000616865 PGAM5Q96HS1 289 aa12.74□□□□□ -0.37
UBXN1-218ENST00000616865 C4orf36Q96KX1 117 aa12.74□□□□□ -0.37
UBXN1-218ENST00000616865 C4orf45Q96LM5 186 aa12.74□□□□□ -0.37
UBXN1-218ENST00000616865 PIMREGQ9BSJ6 248 aa12.74□□□□□ -0.37
UBXN1-218ENST00000616865 JAM3Q9BX67 310 aa12.74□□□□□ -0.37
UBXN1-218ENST00000616865 DUSP21Q9H596 190 aa12.74□□□□□ -0.37
UBXN1-218ENST00000616865 PAK1IP1Q9NWT1 392 aaPredicted RBP12.74□□□□□ -0.37
UBXN1-218ENST00000616865 MRM2Q9UI43 246 aaKnown RBP12.74□□□□□ -0.37
UBXN1-218ENST00000616865 CAB39Q9Y376 341 aaPredicted RBP12.74□□□□□ -0.37
UBXN1-218ENST00000616865 ARFGEF3Q5TH69 2177 aa12.74□□□□□ -0.37
UBXN1-218ENST00000616865 HEATR1Q9H583 2144 aaKnown RBP12.74□□□□□ -0.37
UBXN1-218ENST00000616865 TMEM269A0A1B0GVZ9 245 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 VSTM5A8MXK1 200 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 TBX1O43435 398 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 MT-ND2P03891 347 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 LCKP06239 509 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 FAM157BP0CG42 384 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 LIMS3P0CW19 117 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 LIMS4P0CW20 117 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 C21orf33P30042 268 aaPredicted RBP12.73□□□□□ -0.37
UBXN1-218ENST00000616865 OR12D2P58182 307 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 RPS23P62266 143 aaKnown RBP12.73□□□□□ -0.37
UBXN1-218ENST00000616865 MVKQ03426 396 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 MALLQ13021 153 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 SWI5Q1ZZU3 235 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 KCTD21Q4G0X4 260 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 FAM120AOSQ5T036 256 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 PRSS48Q7RTY5 328 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 SYS1Q8N2H4 156 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 PAQR4Q8N4S7 273 aaPredicted RBP12.73□□□□□ -0.37
UBXN1-218ENST00000616865 SVOPQ8N4V2 548 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 OR5L1Q8NGL2 311 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 ABHD4Q8TB40 342 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 COG8Q96MW5 612 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 SORCS2Q96PQ0 1159 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 NR1H4Q96RI1 486 aaPredicted RBP12.73□□□□□ -0.37
UBXN1-218ENST00000616865 DOK1Q99704 481 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 MND1Q9BWT6 205 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 BCL2L14Q9BZR8 327 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 CLEC2DQ9UHP7 191 aa12.73□□□□□ -0.37
UBXN1-218ENST00000616865 LOC100289279A0A1B0GTE1 492 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 PRR32B1ATL7 298 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 LOC110117498-PIK3R3F6TDL0 507 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 MRPS14O60783 128 aaKnown RBP12.72□□□□□ -0.37
UBXN1-218ENST00000616865 HTR1AP08908 422 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 SLC2A1P11166 492 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 ZNF35P13682 527 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 HNF1AP20823 631 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 DCTDP32321 178 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 NR4A2P43354 598 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 UCP2P55851 309 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 ZNF121P58317 390 aaPredicted RBP12.72□□□□□ -0.37
UBXN1-218ENST00000616865 PSMA6P60900 246 aaKnown RBP12.72□□□□□ -0.37
UBXN1-218ENST00000616865 SNRPD2P62316 118 aaKnown RBP12.72□□□□□ -0.37
UBXN1-218ENST00000616865 MRPL28Q13084 256 aaKnown RBP12.72□□□□□ -0.37
UBXN1-218ENST00000616865 SNTB2Q13425 540 aaKnown RBP12.72□□□□□ -0.37
UBXN1-218ENST00000616865 MST1LQ2TV78 715 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 BCL2L15Q5TBC7 163 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 LIPNQ5VXI9 398 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 VHLLQ6RSH7 139 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 FAM57BQ71RH2 274 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 EGFL6Q8IUX8 553 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 OR1J1Q8NGS3 322 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 OR52N1Q8NH53 320 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 HAVCR2Q8TDQ0 301 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 SPRYD4Q8WW59 207 aaPredicted RBP12.72□□□□□ -0.37
UBXN1-218ENST00000616865 SGCDQ92629 289 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 APOBEC3DQ96AK3 386 aaPredicted RBP12.72□□□□□ -0.37
UBXN1-218ENST00000616865 MSI2Q96DH6 328 aaKnown RBP12.72□□□□□ -0.37
UBXN1-218ENST00000616865 CDCA4Q9BXL8 241 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 ACOXLQ9NUZ1 547 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 R4GMQ9 66 aa12.72□□□□□ -0.37
UBXN1-218ENST00000616865 IGHV4-61A0A0C4DH41 118 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 TMEM129A0AVI4 362 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 ACOD1A6NK06 481 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 NR4A1P22736 598 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 OTX1P32242 354 aaPredicted RBP12.71□□□□□ -0.37
UBXN1-218ENST00000616865 PSMB10P40306 273 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 WNT5AP41221 380 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 CDH15P55291 814 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 PPP1CBP62140 327 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 TIGD6Q17RP2 521 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 RSPO1Q2MKA7 263 aaPredicted RBP12.71□□□□□ -0.37
UBXN1-218ENST00000616865 GFOD2Q3B7J2 385 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 KRTAP27-1Q3LI81 207 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 ZNF684Q5T5D7 378 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 OR2G6Q5TZ20 316 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 RNLSQ5VYX0 342 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 NAA40Q86UY6 237 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 COMMD2Q86X83 199 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 C1orf174Q8IYL3 243 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 OR52H1Q8NGJ2 320 aa12.71□□□□□ -0.37
UBXN1-218ENST00000616865 GATAD2BQ8WXI9 593 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms