RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 RNLSQ5VYX0 342 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 CREB3L2Q70SY1 520 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 BPHLQ86WA6 291 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 LGALS8O00214 317 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 OGG1O15527 345 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 SEMA7AO75326 666 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 SCO1O75880 301 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 RBP2P50120 134 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 MECP2P51608 486 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 PLA2G7Q13093 441 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 TAF9Q16594 264 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 CLVS2Q5SYC1 327 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 RELL2Q8NC24 303 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 DUSP15Q9H1R2 295 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 SAV1Q9H4B6 383 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 P4HTMQ9NXG6 502 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 LUZP4Q9P127 313 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 TSPAN15O95858 294 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 FAM74A1Q5RGS3 127 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 ZNF687Q8N1G0 1237 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 ZNF709Q8N972 641 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 UCN2Q96RP3 112 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 MOB1AQ9H8S9 216 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 TANC1Q9C0D5 1861 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 ANKRD34BA5PLL1 514 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 LIPT2A6NK58 231 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 CD300LBA8K4G0 201 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 K7EPK0 472 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 PNLIPP16233 465 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 IL11RAQ14626 422 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 CLINT1Q14677 625 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 SHBQ15464 509 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 GSG1Q2KHT4 349 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 RTL6Q6ICC9 239 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 FAM219AQ8IW50 185 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 FAM71E2Q8N5Q1 922 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 KCNJ15Q99712 375 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 OCSTAMPQ9BR26 566 aa7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 NXF2Q9GZY0 626 aaKnown RBP7.96□□□□□ -1.13
PDLIM5-222ENST00000615540 A0A087WZY1 265 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 DCTN6O00399 190 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 DHHO43323 396 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 NXPH2O95156 264 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 TIAF1O95411 115 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 INHBBP09529 407 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 HAAOP46952 286 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 ACSM1Q08AH1 577 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 LHFPL2Q6ZUX7 228 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 TMEM178AQ8NBL3 297 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 ARL11Q969Q4 196 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 UCK1Q9HA47 277 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 FANCFQ9NPI8 374 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 TMEM9BQ9NQ34 198 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 DUSP13Q9UII6 198 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 HDGFL3Q9Y3E1 203 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 GIPP09681 153 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 TRAPPC2P0DI81 140 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 TRAPPC2BP0DI82 140 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 MEOX1P50221 254 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 ZNF133P52736 654 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 CXorf67Q86X51 503 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 DEFB124Q8NES8 71 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 PXT1Q8NFP0 134 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 OR8B12Q8NGG6 310 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 ARHGAP5-AS1Q96IT6 56 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 UFSP2Q9NUQ7 469 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 DOCK6Q96HP0 2047 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 A0A0D9SG52 128 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 A0A1B0GTQ1 180 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 SLC17A2O00624 439 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 PLA2G10O15496 165 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 LMX1BO60663 402 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 TK1P04183 234 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 MGMTP16455 207 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 RPS4Y1P22090 263 aaKnown RBP7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 EXOSC2Q13868 293 aaKnown RBP7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 ARL6IP1Q15041 203 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 RFPL4BQ6ZWI9 263 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 TAS2R5Q9NYW4 299 aa7.96□□□□□ -1.14
PDLIM5-222ENST00000615540 A0A1W2PQD3 144 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 RRADP55042 308 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 AKR1C1Q04828 323 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 DYRK1AQ13627 763 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 EDDM3AQ14507 147 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 AKR1C8PQ5T2L2 129 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 GLDNQ6ZMI3 551 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 OR10D3Q8NH80 312 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 SDSLQ96GA7 329 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 AMELYQ99218 206 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 ESRP2Q9H6T0 727 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 PPP1R3CQ9UQK1 317 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 A0A1B0GUH1 482 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 ARPC3O15145 178 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 GMDSO60547 372 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 PCK2Q16822 640 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 IAH1Q2TAA2 248 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 CATSPERDQ86XM0 798 aa7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 NUP214P35658 2090 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 SPTBN5Q9NRC6 3674 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-222ENST00000615540 MEX3AA1L020 520 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms