RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 RBM34P42696 430 aaKnown RBP11.67□□□□□ -0.54
FOXN3-219ENST00000615335 EBPQ15125 230 aaKnown RBP11.67□□□□□ -0.54
FOXN3-219ENST00000615335 RNASE10Q5GAN6 216 aaKnown RBP11.67□□□□□ -0.54
FOXN3-219ENST00000615335 NDUFAF7Q7L592 441 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 PPP1R32Q7Z5V6 425 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 MUC20Q8N307 709 aaPredicted RBP11.67□□□□□ -0.54
FOXN3-219ENST00000615335 RFLNBQ8N5W9 214 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 BEND2Q8NDZ0 799 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 ZNF671Q8TAW3 534 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 R3HDM4Q96D70 268 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 TRIM2Q9C040 744 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 ZNF700Q9H0M5 742 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 TRBV11-1A0A0K0K1C0 115 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 RNF222A6NCQ9 220 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 MFNGO00587 321 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 ARL6IP5O75915 188 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 NGFRP08138 427 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 SFTA3P0C7M3 94 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 PPICP45877 212 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 CAV2P51636 162 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 ACTA2P62736 377 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 ACTG2P63267 376 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 TNFRSF9Q07011 255 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 SRSF4Q08170 494 aaKnown RBP11.66□□□□□ -0.54
FOXN3-219ENST00000615335 RSU1Q15404 277 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 OR8G1Q15617 311 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 ALG10BQ5I7T1 473 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 C11orf87Q6NUJ2 197 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 DRAM2Q6UX65 266 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 ESPNLQ6ZVH7 1005 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 CMTM4Q8IZR5 234 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 PRR18Q8N4B5 295 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 UBAC2Q8NBM4 344 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 OR4K13Q8NH42 304 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 THAP3Q8WTV1 239 aaPredicted RBP11.66□□□□□ -0.54
FOXN3-219ENST00000615335 HOXB13Q92826 284 aaPredicted RBP11.66□□□□□ -0.54
FOXN3-219ENST00000615335 FAM122AQ96E09 287 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 PELI1Q96FA3 418 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 ZNF426Q9BUY5 554 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 WWTR1Q9GZV5 400 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 NXF5Q9H1B4 397 aaKnown RBP11.66□□□□□ -0.54
FOXN3-219ENST00000615335 ZNF160Q9HCG1 818 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 KPTNQ9Y664 436 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 ZFHX4Q86UP3 3567 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 CEP295Q9C0D2 2601 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 ACOT7O00154 380 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 MAGEB4O15481 346 aaPredicted RBP11.66□□□□□ -0.54
FOXN3-219ENST00000615335 OR2T7P0C7T2 308 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 TPT1P13693 172 aaKnown RBP11.66□□□□□ -0.54
FOXN3-219ENST00000615335 ACAA2P42765 397 aaKnown RBP11.66□□□□□ -0.54
FOXN3-219ENST00000615335 HGFACQ04756 655 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 CLN3Q13286 438 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 FHL1Q13642 323 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 CDK5R1Q15078 307 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 KRBOX4Q5JUW0 171 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 CLEC9AQ6UXN8 241 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 SYT9Q86SS6 491 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 SYS1Q8N2H4 156 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 OR56B1Q8NGI3 324 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 OR2T27Q8NH04 317 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 ADIPOR1Q96A54 375 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 SMIM19Q96E16 107 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 CNN2Q99439 309 aaKnown RBP11.66□□□□□ -0.54
FOXN3-219ENST00000615335 LAT2Q9GZY6 243 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 RPS10P5Q9NQ39 176 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 GDF2Q9UK05 429 aaPredicted RBP11.66□□□□□ -0.54
FOXN3-219ENST00000615335 TIMM10BQ9Y5J6 103 aa11.66□□□□□ -0.54
FOXN3-219ENST00000615335 ACOD1A6NK06 481 aa11.65□□□□□ -0.54
FOXN3-219ENST00000615335 A6NLC8 198 aa11.65□□□□□ -0.54
FOXN3-219ENST00000615335 SEC14L6B5MCN3 397 aa11.65□□□□□ -0.54
FOXN3-219ENST00000615335 HIST1H1CP16403 213 aaKnown RBP11.65□□□□□ -0.54
FOXN3-219ENST00000615335 NAA10P41227 235 aaPredicted RBP11.65□□□□□ -0.54
FOXN3-219ENST00000615335 DCAF7P61962 342 aa11.65□□□□□ -0.54
FOXN3-219ENST00000615335 EIF5AP63241 154 aaKnown RBP11.65□□□□□ -0.54
FOXN3-219ENST00000615335 SIRPAP78324 504 aa11.65□□□□□ -0.54
FOXN3-219ENST00000615335 NAAAQ02083 359 aa11.65□□□□□ -0.54
FOXN3-219ENST00000615335 EXT1Q16394 746 aa11.65□□□□□ -0.54
FOXN3-219ENST00000615335 SLC35F2Q8IXU6 374 aa11.65□□□□□ -0.54
FOXN3-219ENST00000615335 IZUMO1Q8IYV9 350 aa11.65□□□□□ -0.54
FOXN3-219ENST00000615335 CCDC107Q8WV48 283 aa11.65□□□□□ -0.54
FOXN3-219ENST00000615335 IMMP1LQ96LU5 166 aa11.65□□□□□ -0.54
FOXN3-219ENST00000615335 NOL4LQ96MY1 436 aaPredicted RBP11.65□□□□□ -0.54
FOXN3-219ENST00000615335 S100A13Q99584 98 aa11.65□□□□□ -0.54
FOXN3-219ENST00000615335 OPN3Q9H1Y3 402 aaPredicted RBP11.65□□□□□ -0.54
FOXN3-219ENST00000615335 TMEM231Q9H6L2 316 aa11.65□□□□□ -0.54
FOXN3-219ENST00000615335 RHOFQ9HBH0 211 aa11.65□□□□□ -0.54
FOXN3-219ENST00000615335 DNAJB12Q9NXW2 375 aaKnown RBP11.65□□□□□ -0.54
FOXN3-219ENST00000615335 CHRNA9Q9UGM1 479 aa11.65□□□□□ -0.54
FOXN3-219ENST00000615335 POMT1Q9Y6A1 747 aa11.65□□□□□ -0.54
FOXN3-219ENST00000615335 TMEM272A0A1B0GTI8 110 aa11.65□□□□□ -0.55
FOXN3-219ENST00000615335 OR5H14A6NHG9 310 aa11.65□□□□□ -0.55
FOXN3-219ENST00000615335 NDUFB2O95178 105 aa11.65□□□□□ -0.55
FOXN3-219ENST00000615335 RLN1P04808 185 aa11.65□□□□□ -0.55
FOXN3-219ENST00000615335 UCHL1P09936 223 aa11.65□□□□□ -0.55
FOXN3-219ENST00000615335 LIFP15018 202 aa11.65□□□□□ -0.55
FOXN3-219ENST00000615335 RPS2P15880 293 aaKnown RBP11.65□□□□□ -0.55
FOXN3-219ENST00000615335 MAS1LP35410 378 aa11.65□□□□□ -0.55
FOXN3-219ENST00000615335 OR2B8PP59922 312 aa11.65□□□□□ -0.55
FOXN3-219ENST00000615335 NDUFAF6Q330K2 333 aa11.65□□□□□ -0.55
FOXN3-219ENST00000615335 SAPCD1Q5SSQ6 148 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms