RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 KTI12Q96EK9 354 aaPredicted RBP8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 OR2M2Q96R28 347 aa8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 C20orf85Q9H1P6 137 aa8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 SLC39A9Q9NUM3 307 aa8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 LNP1A1A4G5 178 aa8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 PRR19A6NJB7 356 aa8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 SMPD2O60906 423 aa8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 IL7P13232 177 aa8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 ATF4P18848 351 aaPredicted RBP8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 CD79BP40259 229 aa8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 RPS25P62851 125 aaKnown RBP8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 TIPARPQ7Z3E1 657 aaKnown RBP8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 PIK3IP1Q96FE7 263 aa8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 DMRTB1Q96MA1 342 aa8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 VSTM2LQ96N03 204 aa8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 COMMD5Q9GZQ3 224 aa8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 MRPL15Q9P015 296 aaKnown RBP8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 RNF7Q9UBF6 113 aa8.71□□□□□ -1.01
TNFRSF9-204ENST00000615230 A0A1B0GTH9 108 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 LIPT2A6NK58 231 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 SERPINE3A8MV23 424 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 TO15178 435 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 HPGDSO60760 199 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 DHRS3O75911 302 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 T-ENOLP0DO92 83 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 TMEM81Q6P7N7 255 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 ADGRG3Q86Y34 549 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 C20orf27Q9GZN8 174 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 FGF20Q9NP95 211 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 HEYLQ9NQ87 328 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 SLC17A5Q9NRA2 495 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 NEU3Q9UQ49 428 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 SLC22A13Q9Y226 551 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 ARPC3O15145 178 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 ADPRMQ3LIE5 342 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 ZNF658BQ4V348 819 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 LGALS14Q8TCE9 139 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 OR14A2Q96R54 314 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 SCN10AQ9Y5Y9 1956 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 TEX51A0A1B0GUA7 166 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 PDGFBP01127 241 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 S100A2P29034 98 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 LTBRP36941 435 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 GK2Q14410 553 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 ATXN7L3Q14CW9 347 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 CMTM2Q8TAZ6 248 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 TMEM56Q96MV1 263 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 TXN2Q99757 166 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 UQCC2Q9BRT2 126 aa8.71□□□□□ -1.02
TNFRSF9-204ENST00000615230 A0A1W2PPV9 198 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 B3GALNT1O75752 331 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 HLA-DMAP28067 261 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 PDLIM4P50479 330 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 ASCL1P50553 236 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 SCAND1P57086 179 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 OR10A3P58181 314 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 BAXQ07812 192 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 ZNF266Q14584 549 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 PABPC1L2AQ5JQF8 200 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 CCDC144NLQ6NUI1 221 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 SPNS3Q6ZMD2 512 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 SLC38A6Q8IZM9 456 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 OR8B4Q96RC9 309 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 HIF1ANQ9NWT6 349 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 OR2M5A3KFT3 312 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 GREM1O60565 184 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 CYTIPO60759 359 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 UPK1BO75841 260 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 CLDN1O95832 211 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 CA5AP35218 305 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 TLE4Q04727 773 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 CALHM3Q86XJ0 350 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 DEFB108BQ8NET1 73 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 CMBLQ96DG6 245 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 ACOXLQ9NUZ1 547 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 THYN1Q9P016 225 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 BRCA1P38398 1863 aaKnown RBP8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 TAS2R45P59539 299 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 NCS1P62166 190 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 RPS27AP62979 156 aaKnown RBP8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 UBA52P62987 128 aaKnown RBP8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 HNF4GQ14541 408 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 HEPHL1Q6MZM0 1159 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 Q6ZRG5 221 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 MOB3BQ86TA1 216 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 SMAP2Q8WU79 429 aaPredicted RBP8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 SEH1LQ96EE3 360 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 ZNF665Q9H7R5 613 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 BIN3Q9NQY0 253 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 ZNFX1Q9P2E3 1918 aaKnown RBP8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 HMX3A6NHT5 357 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 ARPC1BO15143 372 aaKnown RBP8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 PHF1O43189 567 aaPredicted RBP8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 HLA-AP01891 365 aaKnown RBP8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 CD300LDQ6UXZ3 194 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 AKR7LQ8NHP1 331 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 SMIM19Q96E16 107 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 NEIL1Q96FI4 390 aaPredicted RBP8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 NDFIP1Q9BT67 221 aa8.7□□□□□ -1.02
TNFRSF9-204ENST00000615230 SAP30LQ9HAJ7 183 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms