RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 ACOD1A6NK06 481 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 TMEM212A6NML5 194 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 PIN1P1O15428 100 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 GPRIN2O60269 458 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 ICMTO60725 284 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 SMPD2O60906 423 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 RGS9O75916 674 aaPredicted RBP6.92□□□□□ -1.3
PCDH9-205ENST00000614931 GOSR1O95249 250 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 LCATP04180 440 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 FAM157BP0CG42 384 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 CD53P19397 219 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 ACHEP22303 614 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 CCL1P22362 96 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 LOXP28300 417 aaPredicted RBP6.92□□□□□ -1.3
PCDH9-205ENST00000614931 GABRA5P31644 462 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 NCS1P62166 190 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 LSM3P62310 102 aaKnown RBP6.92□□□□□ -1.3
PCDH9-205ENST00000614931 NAAAQ02083 359 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 TBC1D28Q2M2D7 210 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 GFOD2Q3B7J2 385 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 C3orf36Q3SXR2 165 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 ASPHD2Q6ICH7 369 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 UNQ9370/PRO34162Q6UXP9 181 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 Q6ZSR3 168 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 ALDH16A1Q8IZ83 802 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 ZNF676Q8N7Q3 588 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 ABHD4Q8TB40 342 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 HAVCR2Q8TDQ0 301 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 NINJ1Q92982 152 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 SGK3Q96BR1 496 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 ISOC1Q96CN7 298 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 MUCL1Q96DR8 90 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 DACH2Q96NX9 599 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 OR14A2Q96R54 314 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 MYCBPQ99417 103 aaPredicted RBP6.92□□□□□ -1.3
PCDH9-205ENST00000614931 CHCHD6Q9BRQ6 235 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 LIME1Q9H400 295 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 CDH20Q9HBT6 801 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 EXOSC4Q9NPD3 245 aaKnown RBP6.92□□□□□ -1.3
PCDH9-205ENST00000614931 GPR84Q9NQS5 396 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 PTTG3PQ9NZH4 202 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 ZNF281Q9Y2X9 895 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 STARD10Q9Y365 291 aa6.92□□□□□ -1.3
PCDH9-205ENST00000614931 CHD3Q12873 2000 aaKnown RBP6.92□□□□□ -1.3
PCDH9-205ENST00000614931 RAI1Q7Z5J4 1906 aaPredicted RBP6.91□□□□□ -1.3
PCDH9-205ENST00000614931 TRBV5-7A0A0A0MS05 114 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 A0A0U1RQV5 110 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 LOC100506127A0A0U1RQW1 187 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 hCG_38984A0A1B0GV85 526 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 TRDV1A0A1B0GX56 115 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 A0A1W2PPK0 400 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 ANKRD61A6NGH8 418 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 ATP6V1G2-DDX39BF2Z307 99 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 H3BMQ9 156 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 AIREO43918 545 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 ATE1O95260 518 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 ISG15P05161 165 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 CLEC2LP0C7M8 214 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 UBCP0CG48 685 aaKnown RBP6.91□□□□□ -1.3
PCDH9-205ENST00000614931 ACKR3P25106 362 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 CD40P25942 277 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 PCSK6P29122 969 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 TTKP33981 857 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 MPV17P39210 176 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 SOX2P48431 317 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 ART1P52961 327 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 VBP1P61758 197 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 ZNF92Q03936 586 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 HLXQ14774 488 aaPredicted RBP6.91□□□□□ -1.3
PCDH9-205ENST00000614931 SPCS2Q15005 226 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 ACSM3Q53FZ2 586 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 SPATA46Q5T0L3 261 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 C22orf42Q6IC83 251 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 ZNF704Q6ZNC4 412 aaPredicted RBP6.91□□□□□ -1.3
PCDH9-205ENST00000614931 PLPP7Q8NBV4 271 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 OR1J2Q8NGS2 313 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 OR14K1Q8NGZ2 314 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 NDNFQ8TB73 568 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 SPSB4Q96A44 273 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 APOBEC3DQ96AK3 386 aaPredicted RBP6.91□□□□□ -1.3
PCDH9-205ENST00000614931 C12orf43Q96C57 262 aaKnown RBP6.91□□□□□ -1.3
PCDH9-205ENST00000614931 ADAT3Q96EY9 351 aaPredicted RBP6.91□□□□□ -1.3
PCDH9-205ENST00000614931 REEP6Q96HR9 211 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 FAM71F1Q96KD3 344 aaPredicted RBP6.91□□□□□ -1.3
PCDH9-205ENST00000614931 DERL3Q96Q80 235 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 FOXC2Q99958 501 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 MED18Q9BUE0 208 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 COMMD4Q9H0A8 199 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 OR10A2Q9H208 303 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 CXXC4Q9H2H0 198 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 PPP1R3EQ9H7J1 279 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 PLEKHF2Q9H8W4 249 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 TXNL4BQ9NX01 149 aaKnown RBP6.91□□□□□ -1.3
PCDH9-205ENST00000614931 V9GYS6 101 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 ROS1P08922 2347 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 ANKHD1Q8IWZ3 2542 aaKnown RBP6.91□□□□□ -1.3
PCDH9-205ENST00000614931 ARFGEF3Q5TH69 2177 aa6.91□□□□□ -1.3
PCDH9-205ENST00000614931 TRAV8-7A0A075B6U6 113 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 SMIM31A0A1B0GVY4 71 aa6.9□□□□□ -1.3
PCDH9-205ENST00000614931 SMIM30A4D0T7 59 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms