RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 A0A1B0GV90 55 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 SLC17A2O00624 439 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 HSD17B6O14756 317 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 ARSJQ5FYB0 599 aaPredicted RBP7.99□□□□□ -1.13
TTC28-208ENST00000612946 LBX2Q6XYB7 198 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 STAC2Q6ZMT1 411 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 CALHM2Q9HA72 323 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 DOK5Q9P104 306 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 KIAA1456Q9P272 454 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 LIPFP07098 398 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 SELEP16581 610 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 CLDN12P56749 244 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 OR8G2PQ6IF36 304 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 ZNF765Q7L2R6 523 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 CAMKMTQ7Z624 323 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 A0A0D9SEW6 157 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 MAN2B1O00754 1011 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 PLPP2O43688 288 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 NUDT3O95989 172 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 HOXC13P31276 330 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 DCTDP32321 178 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 SHHQ15465 462 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 PLPPR5Q32ZL2 321 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 PRRT3Q5FWE3 981 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 USP53Q70EK8 1073 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 OR7C1O76099 320 aaPredicted RBP7.99□□□□□ -1.13
TTC28-208ENST00000612946 POLR2IP36954 125 aaKnown RBP7.99□□□□□ -1.13
TTC28-208ENST00000612946 CARD17Q5XLA6 110 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 MRGPRGQ86SM5 289 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 CHST14Q8NCH0 376 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 NEIL2Q969S2 332 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 PHLPP1O60346 1717 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 RHBDL1O75783 438 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 SEC11BP0C7V7 166 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 EPHA2P29317 976 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 IKZF1Q13422 519 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 VGLL4Q14135 290 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 TMEM164Q5U3C3 297 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 IL1F10Q8WWZ1 152 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 MMABQ96EY8 250 aaPredicted RBP7.99□□□□□ -1.13
TTC28-208ENST00000612946 VAX2Q9UIW0 290 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 MARF1Q9Y4F3 1742 aaKnown RBP7.99□□□□□ -1.13
TTC28-208ENST00000612946 PCNX1Q96RV3 2341 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 F7P08709 466 aaPredicted RBP7.99□□□□□ -1.13
TTC28-208ENST00000612946 NID1P14543 1247 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 GABREP78334 506 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 C12orf73Q69YU5 71 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 FAM57BQ71RH2 274 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 ACVR1CQ8NER5 493 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 MS4A3Q96HJ5 214 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 OR1A1Q9P1Q5 309 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 SLC45A1Q9Y2W3 748 aa7.99□□□□□ -1.13
TTC28-208ENST00000612946 LOC107986453A0A1B0GWG9 222 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 PRSS23O95084 383 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 IRS1P35568 1242 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 SYT9Q86SS6 491 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 SLC25A43Q8WUT9 341 aaPredicted RBP7.98□□□□□ -1.13
TTC28-208ENST00000612946 DEGS1O15121 323 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 ZNF737O75373 536 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 LINC00614P0C842 121 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 FCGR2AP12318 317 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 CEBPBP17676 345 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 CHRNB4P30926 498 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 GABRA4P48169 554 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 SLC25A1P53007 311 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 SNRPNP63162 240 aaKnown RBP7.98□□□□□ -1.13
TTC28-208ENST00000612946 MUC20Q8N307 709 aaPredicted RBP7.98□□□□□ -1.13
TTC28-208ENST00000612946 TEAD3Q99594 435 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 GSN-AS1Q9NRJ2 163 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 TNFRSF10CO14798 259 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 GPR75O95800 540 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 CD3DP04234 171 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 RHOBP62745 196 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 FPGSQ05932 587 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 LIPIQ6XZB0 460 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 Q6ZPB1 254 aaPredicted RBP7.98□□□□□ -1.13
TTC28-208ENST00000612946 ZNF573Q86YE8 665 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 OR2M7Q8NG81 312 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 WDR92Q96MX6 357 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 NPIPB9F8W1W9 429 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 PTOV1Q86YD1 416 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 ZNF687Q8N1G0 1237 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 WRAP73Q9P2S5 460 aaPredicted RBP7.98□□□□□ -1.13
TTC28-208ENST00000612946 SOCS6O14544 535 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 PAX5Q02548 391 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 BSXQ3C1V8 233 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 PHLDA2Q53GA4 152 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 OR5AR1Q8NGP9 310 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 TCN2P20062 427 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 KIR2DS2P43631 304 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 MPV17LQ2QL34 196 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 ACACAQ13085 2346 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 DUX1O43812 170 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 EIF3GO75821 320 aaKnown RBP eCLIP7.98□□□□□ -1.13
TTC28-208ENST00000612946 ZIC2O95409 532 aaPredicted RBP7.98□□□□□ -1.13
TTC28-208ENST00000612946 SMPD1P17405 629 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 BMPR1AP36894 532 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 MMP16P51512 607 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 CARD18P57730 90 aa7.98□□□□□ -1.13
TTC28-208ENST00000612946 SLC35G1Q2M3R5 365 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms