RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 CTSFQ9UBX1 484 aa8.61□□□□□ -1.03
SRGAP2B-204ENST00000612199 TMEM129A0AVI4 362 aa8.61□□□□□ -1.03
SRGAP2B-204ENST00000612199 TARM1B6A8C7 271 aa8.61□□□□□ -1.03
SRGAP2B-204ENST00000612199 DEGS1O15121 323 aa8.61□□□□□ -1.03
SRGAP2B-204ENST00000612199 TO15178 435 aa8.61□□□□□ -1.03
SRGAP2B-204ENST00000612199 PEX11BO96011 259 aa8.61□□□□□ -1.03
SRGAP2B-204ENST00000612199 SRSF9Q13242 221 aaKnown RBP eCLIP8.61□□□□□ -1.03
SRGAP2B-204ENST00000612199 WDR73Q6P4I2 378 aa8.61□□□□□ -1.03
SRGAP2B-204ENST00000612199 NKAIN4Q8IVV8 208 aa8.61□□□□□ -1.03
SRGAP2B-204ENST00000612199 OR1J1Q8NGS3 322 aa8.61□□□□□ -1.03
SRGAP2B-204ENST00000612199 DUSP21Q9H596 190 aa8.61□□□□□ -1.03
SRGAP2B-204ENST00000612199 CLEC2DQ9UHP7 191 aa8.61□□□□□ -1.03
SRGAP2B-204ENST00000612199 NXT1Q9UKK6 140 aaKnown RBP8.61□□□□□ -1.03
SRGAP2B-204ENST00000612199 SPDEFO95238 335 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 TTRP02766 147 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 THBS1P07996 1170 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 HOXB5P09067 269 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 FPR2P25090 351 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 APEX1P27695 318 aaKnown RBP8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 ERHP84090 104 aaKnown RBP8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 SAPCD1Q5SSQ6 148 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 COL13A1Q5TAT6 717 aaPredicted RBP8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 TMEM88Q6PEY1 159 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 HARBI1Q96MB7 349 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 UBE2ZQ9H832 354 aaPredicted RBP8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 SLC22A13Q9Y226 551 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 XKRY2A2RUG3 117 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 ZNF593O00488 134 aaPredicted RBP8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 ELK1P19419 428 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 SLC36A2Q495M3 483 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 STUMQ69YW2 141 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 LINC00346Q8IVM7 164 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 LAX1Q8IWV1 398 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 PFN4Q8NHR9 129 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 DAPP1Q9UN19 280 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 PPM1DO15297 605 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 CATR1Q13166 79 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 C15orf54Q8N8G6 183 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 ADAMTSL1Q8N6G6 1762 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 SNRPBP14678 240 aaKnown RBP8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 EIF1P41567 113 aaKnown RBP8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 RBMS2Q15434 407 aaKnown RBP8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 TMEM97Q5BJF2 176 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 Q6ZS52 159 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 LACC1Q8IV20 430 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 C11orf68Q9H3H3 251 aaKnown RBP8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 NPAP1Q9NZP6 1156 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 C19orf53Q9UNZ5 99 aaPredicted RBP8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 ARAP2Q8WZ64 1704 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 CXorf51AA0A1B0GTR3 108 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 FCMRO60667 390 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 DHRS3O75911 302 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 B4GALNT1Q00973 533 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 C19orf57Q0VDD7 668 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 ZNF169Q14929 603 aaPredicted RBP8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 CLVS2Q5SYC1 327 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 STEAP1BQ6NZ63 245 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 DHRS4L2Q6PKH6 230 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 AAED1Q7RTV5 226 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 TSEN54Q7Z6J9 526 aaKnown RBP8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 KLHDC8BQ8IXV7 354 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 ACY3Q96HD9 319 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 PKMYT1Q99640 499 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 PHF7Q9BWX1 381 aaPredicted RBP8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 VN1R3Q9BXE9 311 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 GABARAPL1Q9H0R8 117 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 ACER3Q9NUN7 267 aa8.6□□□□□ -1.03
SRGAP2B-204ENST00000612199 FGF17O60258 216 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 MPDU1O75352 247 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 SMIM18P0DKX4 95 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 TPT1P13693 172 aaKnown RBP8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 PTBP1P26599 531 aaKnown RBP eCLIP8.59□□□□□ -1.038e-17■□□□□ 8.9
SRGAP2B-204ENST00000612199 GDNFP39905 211 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 NDUFAF7Q7L592 441 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 H2BFWTQ7Z2G1 175 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 FAM26EQ8N5C1 309 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 OR2C3Q8N628 320 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 ZFAND1Q8TCF1 268 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 RASD2Q96D21 266 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 C1orf198Q9H425 327 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 WDR76Q9H967 626 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 OR7C2O60412 319 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 PITX3O75364 302 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 PPP3CBP16298 524 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 PEA15Q15121 130 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 ACTBL2Q562R1 376 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 SLC35D3Q5M8T2 416 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 ELFN2Q5R3F8 820 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 APOOLQ6UXV4 268 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 BHLHA9Q7RTU4 235 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 OR56B1Q8NGI3 324 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 OR5D18Q8NGL1 313 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 UBALD1Q8TB05 177 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 NOX4Q9NPH5 578 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 PARP11Q9NR21 331 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 SEMA4GQ9NTN9 838 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 BEX4Q9NWD9 120 aaPredicted RBP8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 CLPSL1A2RUU4 121 aa8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 CSO75390 466 aaKnown RBP8.59□□□□□ -1.03
SRGAP2B-204ENST00000612199 SEMG1P04279 462 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms