RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 SFRP5Q5T4F7 317 aa11.16□□□□□ -0.62
CDH1-212ENST00000611625 TRILQ7L0X0 811 aa11.16□□□□□ -0.62
CDH1-212ENST00000611625 LFNGQ8NES3 379 aa11.16□□□□□ -0.62
CDH1-212ENST00000611625 NOXO1Q8NFA2 376 aa11.16□□□□□ -0.62
CDH1-212ENST00000611625 OR52H1Q8NGJ2 320 aa11.16□□□□□ -0.62
CDH1-212ENST00000611625 CRISPLD2Q9H0B8 497 aa11.16□□□□□ -0.62
CDH1-212ENST00000611625 KCNK15Q9H427 330 aa11.16□□□□□ -0.62
CDH1-212ENST00000611625 PCOLCE2Q9UKZ9 415 aa11.16□□□□□ -0.62
CDH1-212ENST00000611625 TRAPPC2LQ9UL33 140 aa11.16□□□□□ -0.62
CDH1-212ENST00000611625 KNTC1P50748 2209 aa11.16□□□□□ -0.62
CDH1-212ENST00000611625 NME2P1O60361 137 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 ZNF354AO60765 605 aaPredicted RBP11.15□□□□□ -0.62
CDH1-212ENST00000611625 F10P00742 488 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 CDC20BQ86Y33 519 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 PPP1R35Q8TAP8 253 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 CALHM2Q9HA72 323 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 HDGFL3Q9Y3E1 203 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 FLVCR1Q9Y5Y0 555 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 SPTBP11277 2137 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 SIP14410 1827 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 SHISA8B8ZZ34 492 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 ZNF250P15622 560 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 NKX2-1P43699 371 aaPredicted RBP11.15□□□□□ -0.62
CDH1-212ENST00000611625 ERVK-16P61578 105 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 DCAF12Q5T6F0 453 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 LYPD8Q6UX82 237 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 BATF2Q8N1L9 274 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 UQCC2Q9BRT2 126 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 ZNF223Q9UK11 482 aaPredicted RBP11.15□□□□□ -0.62
CDH1-212ENST00000611625 PCDHGA9Q9Y5G4 932 aaKnown RBP11.15□□□□□ -0.62
CDH1-212ENST00000611625 SRFP11831 508 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 C1QL3Q5VWW1 255 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 YRDCQ86U90 279 aaKnown RBP11.15□□□□□ -0.62
CDH1-212ENST00000611625 ZFP82Q8N141 532 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 OR56B2PQ8NGI1 322 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 OR14J1Q9UGF5 321 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 TET1Q8NFU7 2136 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 PSME4Q14997 1843 aa11.15□□□□□ -0.62
CDH1-212ENST00000611625 DHHO43323 396 aa11.15□□□□□ -0.63
CDH1-212ENST00000611625 IFNA4P05014 189 aa11.15□□□□□ -0.63
CDH1-212ENST00000611625 FAHP16930 419 aa11.15□□□□□ -0.63
CDH1-212ENST00000611625 HOXD11P31277 338 aaPredicted RBP11.15□□□□□ -0.63
CDH1-212ENST00000611625 ACAA2P42765 397 aaKnown RBP11.15□□□□□ -0.63
CDH1-212ENST00000611625 KIR2DL1P43626 348 aaPredicted RBP11.15□□□□□ -0.63
CDH1-212ENST00000611625 MYBPHQ13203 477 aa11.15□□□□□ -0.63
CDH1-212ENST00000611625 OR2W3Q7Z3T1 314 aa11.15□□□□□ -0.63
CDH1-212ENST00000611625 CLRN3Q8NCR9 226 aa11.15□□□□□ -0.63
CDH1-212ENST00000611625 OR2G3Q8NGZ4 309 aa11.15□□□□□ -0.63
CDH1-212ENST00000611625 OIT3Q8WWZ8 545 aa11.15□□□□□ -0.63
CDH1-212ENST00000611625 SDHCQ99643 169 aaPredicted RBP11.15□□□□□ -0.63
CDH1-212ENST00000611625 NIPSNAP3BQ9BS92 247 aa11.15□□□□□ -0.63
CDH1-212ENST00000611625 C20orf24Q9BUV8 137 aa11.15□□□□□ -0.63
CDH1-212ENST00000611625 GHITMQ9H3K2 345 aa11.15□□□□□ -0.63
CDH1-212ENST00000611625 PLEKHA2Q9HB19 425 aa11.15□□□□□ -0.63
CDH1-212ENST00000611625 SIT1Q9Y3P8 196 aa11.15□□□□□ -0.63
CDH1-212ENST00000611625 ALPK2Q86TB3 2170 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 LINC00862A6NCI5 91 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 ZNF587BE7ETH6 402 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 IGHV3-9P01782 118 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 OR13C7P0DN81 318 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 HBG1P69891 147 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 HBG2P69892 147 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 OR10AC1Q8NH08 325 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 OR51F2Q8NH61 342 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 KIRREL1Q96J84 757 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 PHF7Q9BWX1 381 aaPredicted RBP11.14□□□□□ -0.63
CDH1-212ENST00000611625 TRAV8-7A0A075B6U6 113 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 KIR2DS1A0A191URI9 304 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 FAM221AA4D161 298 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 CEBPZOSA8MTT3 80 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 C2CD4DB7Z1M9 353 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 MYF5P13349 255 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 GCH1P30793 250 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 KIR2DS4P43632 304 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 KIR2DS1Q14954 304 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 C1QTNF12Q5T7M4 302 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 SHEQ5VZ18 495 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 ADAM5Q6NVV9 412 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 ATOH1Q92858 354 aaPredicted RBP11.14□□□□□ -0.63
CDH1-212ENST00000611625 MALSU1Q96EH3 234 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 OPN4Q9UHM6 478 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 PURGQ9UJV8 347 aaKnown RBP11.14□□□□□ -0.63
CDH1-212ENST00000611625 RAB19A4D1S5 217 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 SERPINE3A8MV23 424 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 SPINT1O43278 529 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 FOLR1P15328 257 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 ETFDHQ16134 617 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 OR1L3Q8NH93 324 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 C2CD4CQ8TF44 421 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 FOXQ1Q9C009 403 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 PCDHB10Q9UN67 800 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 RNF212BA8MTL3 300 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 E5RGE8 158 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 TPPPO94811 219 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 MPZL1O95297 269 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 ARG2P78540 354 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 C19orf57Q0VDD7 668 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 FAM109BQ6ICB4 259 aaPredicted RBP11.14□□□□□ -0.63
CDH1-212ENST00000611625 TFAP2EQ6VUC0 442 aa11.14□□□□□ -0.63
CDH1-212ENST00000611625 SYT13Q7L8C5 426 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms