RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 KCTD18Q6PI47 426 aaPredicted RBP11.3□□□□□ -0.6
SENP3-209ENST00000610454 SLC16A9Q7RTY1 509 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 FTMTQ8N4E7 242 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 TEX29Q8N6K0 151 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 CELF2-AS1Q8N7Q2 184 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 OR56B2PQ8NGI1 322 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 ZNF420Q8TAQ5 688 aaPredicted RBP11.3□□□□□ -0.6
SENP3-209ENST00000610454 ERGIC1Q969X5 290 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 REEP6Q96HR9 211 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 AMELYQ99218 206 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 TEAD3Q99594 435 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 CIB1Q99828 191 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 OSBPL10Q9BXB5 764 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 YIPF3Q9GZM5 350 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 NIPAL2Q9H841 368 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 DCAF16Q9NXF7 216 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 MRPL15Q9P015 296 aaKnown RBP11.3□□□□□ -0.6
SENP3-209ENST00000610454 TMEM14AQ9Y6G1 99 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 A0A0G2JMP0 313 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 A0A0X1KG70 313 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 SAC3D1A6NKF1 404 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 SLC22A31A6NKX4 558 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 ZAR1LA6NP61 321 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 TMEM178BH3BS89 294 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 PRKYO43930 277 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 PNPP00491 289 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 MRPL3P09001 348 aaKnown RBP11.29□□□□□ -0.6
SENP3-209ENST00000610454 CD200P41217 278 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 ACTR3P61158 418 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 SCGB2A2Q13296 93 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 SLX4IPQ5VYV7 408 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 FAHD2BQ6P2I3 314 aaPredicted RBP11.29□□□□□ -0.6
SENP3-209ENST00000610454 LRRN1Q6UXK5 716 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 KLBQ86Z14 1044 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 TCEANCQ8N8B7 351 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 SPERTQ8NA61 448 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 OR4M2Q8NGB6 313 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 OR8S1Q8NH09 359 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 FAHD2AQ96GK7 314 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 RAB3IPQ96QF0 476 aaPredicted RBP11.29□□□□□ -0.6
SENP3-209ENST00000610454 CNN2Q99439 309 aaKnown RBP11.29□□□□□ -0.6
SENP3-209ENST00000610454 RBM4BQ9BQ04 359 aaKnown RBP11.29□□□□□ -0.6
SENP3-209ENST00000610454 MROQ9BYG7 248 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 RIBC2Q9H4K1 309 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 RGCCQ9H4X1 137 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 FN3KRPQ9HA64 309 aa11.29□□□□□ -0.6
SENP3-209ENST00000610454 ATRQ13535 2644 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 A0A1B0GWJ7 208 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 M0R129 80 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 PLPP2O43688 288 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 FOXH1O75593 365 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 CYB5R3P00387 301 aaPredicted RBP11.28□□□□□ -0.6
SENP3-209ENST00000610454 GNALP38405 381 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 GATA4P43694 442 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 PSMA6P60900 246 aaKnown RBP11.28□□□□□ -0.6
SENP3-209ENST00000610454 LCN2P80188 198 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 ZMYND11Q15326 602 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 ZNF181Q2M3W8 571 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 ESCO2Q56NI9 601 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 DCAF12L2Q5VW00 463 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 NXNL2Q5VZ03 156 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 C12orf73Q69YU5 71 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 MEPCEQ7L2J0 689 aaKnown RBP11.28□□□□□ -0.6
SENP3-209ENST00000610454 LRRC28Q86X40 367 aaPredicted RBP11.28□□□□□ -0.6
SENP3-209ENST00000610454 GID4Q8IVV7 300 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 TMEM163Q8TC26 289 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 ASB17Q8WXJ9 295 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 SPSB4Q96A44 273 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 SIGLEC11Q96RL6 698 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 IL4I1Q96RQ9 567 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 UFSP2Q9NUQ7 469 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 C14orf119Q9NWQ9 140 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 IKZF2Q9UKS7 526 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 LRP12Q9Y561 859 aa11.28□□□□□ -0.6
SENP3-209ENST00000610454 C5orf63A6NC05 138 aa11.27□□□□□ -0.61
SENP3-209ENST00000610454 A6NLC8 198 aa11.27□□□□□ -0.61
SENP3-209ENST00000610454 PHYHO14832 338 aa11.27□□□□□ -0.61
SENP3-209ENST00000610454 RPS2P15880 293 aaKnown RBP11.27□□□□□ -0.61
SENP3-209ENST00000610454 ALOX5APP20292 161 aa11.27□□□□□ -0.61
SENP3-209ENST00000610454 GATA3P23771 443 aa11.27□□□□□ -0.61
SENP3-209ENST00000610454 EPHA2P29317 976 aa11.27□□□□□ -0.61
SENP3-209ENST00000610454 FAM3AP98173 230 aa11.27□□□□□ -0.61
SENP3-209ENST00000610454 HNRNPA0Q13151 305 aaKnown RBP11.27□□□□□ -0.61
SENP3-209ENST00000610454 MAB21L1Q13394 359 aa11.27□□□□□ -0.61
SENP3-209ENST00000610454 PRAMEF6Q5VXH4 476 aa11.27□□□□□ -0.61
SENP3-209ENST00000610454 DEGS2Q6QHC5 323 aa11.27□□□□□ -0.61
SENP3-209ENST00000610454 NLRC3Q7RTR2 1065 aa11.27□□□□□ -0.61
SENP3-209ENST00000610454 COMMD2Q86X83 199 aa11.27□□□□□ -0.61
SENP3-209ENST00000610454 PLPP7Q8NBV4 271 aa11.27□□□□□ -0.61
SENP3-209ENST00000610454 CSNK2A3Q8NEV1 391 aa11.27□□□□□ -0.61
SENP3-209ENST00000610454 FAM81AQ8TBF8 368 aa11.27□□□□□ -0.61
SENP3-209ENST00000610454 SGK3Q96BR1 496 aa11.27□□□□□ -0.61
SENP3-209ENST00000610454 GABARAPL3Q9BY60 117 aa11.27□□□□□ -0.61
SENP3-209ENST00000610454 PATZ1Q9HBE1 687 aaKnown RBP11.27□□□□□ -0.61
SENP3-209ENST00000610454 ZNF391Q9UJN7 358 aa11.27□□□□□ -0.61
SENP3-209ENST00000610454 KLHDC2Q9Y2U9 406 aa11.27□□□□□ -0.61
SENP3-209ENST00000610454 MXRA5Q9NR99 2828 aa11.27□□□□□ -0.61
SENP3-209ENST00000610454 WNK2Q9Y3S1 2297 aa11.26□□□□□ -0.61
SENP3-209ENST00000610454 PPIAL4EA0A075B759 164 aa11.26□□□□□ -0.61
SENP3-209ENST00000610454 hCG_38984A0A1B0GV85 526 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms