RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 PTGES3Q15185 160 aaKnown RBP16.17■□□□□ 0.18
SGMS1-208ENST00000608287 SNAI3Q3KNW1 292 aa16.17■□□□□ 0.18
SGMS1-208ENST00000608287 PGAP1Q75T13 922 aa16.17■□□□□ 0.18
SGMS1-208ENST00000608287 SHFQ7M4L6 423 aa16.17■□□□□ 0.18
SGMS1-208ENST00000608287 MRPL21Q7Z2W9 205 aaKnown RBP16.17■□□□□ 0.18
SGMS1-208ENST00000608287 TIGD4Q8IY51 512 aa16.17■□□□□ 0.18
SGMS1-208ENST00000608287 ZNF283Q8N7M2 679 aa16.17■□□□□ 0.18
SGMS1-208ENST00000608287 SIGLECL1Q8N7X8 197 aa16.17■□□□□ 0.18
SGMS1-208ENST00000608287 BBS1Q8NFJ9 593 aa16.17■□□□□ 0.18
SGMS1-208ENST00000608287 OR10AD1Q8NGE0 317 aa16.17■□□□□ 0.18
SGMS1-208ENST00000608287 OR13G1Q8NGZ3 307 aa16.17■□□□□ 0.18
SGMS1-208ENST00000608287 ITLN1Q8WWA0 313 aa16.17■□□□□ 0.18
SGMS1-208ENST00000608287 RAB1CQ92928 201 aa16.17■□□□□ 0.18
SGMS1-208ENST00000608287 ABHD6Q9BV23 337 aa16.17■□□□□ 0.18
SGMS1-208ENST00000608287 SEMA6AQ9H2E6 1030 aa16.17■□□□□ 0.18
SGMS1-208ENST00000608287 MARCH7Q9H992 704 aa16.17■□□□□ 0.18
SGMS1-208ENST00000608287 IL19Q9UHD0 177 aa16.17■□□□□ 0.18
SGMS1-208ENST00000608287 WIPI2Q9Y4P8 454 aa16.17■□□□□ 0.18
SGMS1-208ENST00000608287 N6AMT1Q9Y5N5 214 aa16.17■□□□□ 0.18
SGMS1-208ENST00000608287 TANC2Q9HCD6 1990 aa16.17■□□□□ 0.18
SGMS1-208ENST00000608287 DNAJC9-AS1A6NH13 148 aa16.16■□□□□ 0.18
SGMS1-208ENST00000608287 CLDN34H7C241 214 aa16.16■□□□□ 0.18
SGMS1-208ENST00000608287 M0QZ24 198 aa16.16■□□□□ 0.18
SGMS1-208ENST00000608287 EBAG9O00559 213 aa16.16■□□□□ 0.18
SGMS1-208ENST00000608287 SELENOFO60613 162 aa16.16■□□□□ 0.18
SGMS1-208ENST00000608287 FSHBP01225 129 aa16.16■□□□□ 0.18
SGMS1-208ENST00000608287 SLC2A1P11166 492 aa16.16■□□□□ 0.18
SGMS1-208ENST00000608287 HSD11B1P28845 292 aa16.16■□□□□ 0.18
SGMS1-208ENST00000608287 SLC15A1P46059 708 aa16.16■□□□□ 0.18
SGMS1-208ENST00000608287 GRB2P62993 217 aaKnown RBP16.16■□□□□ 0.18
SGMS1-208ENST00000608287 BAMBIQ13145 260 aa16.16■□□□□ 0.18
SGMS1-208ENST00000608287 ARMCX4Q5H9R4 360 aa16.16■□□□□ 0.18
SGMS1-208ENST00000608287 PYDC1Q8WXC3 89 aa16.16■□□□□ 0.18
SGMS1-208ENST00000608287 C22orf15Q8WYQ4 148 aa16.16■□□□□ 0.18
SGMS1-208ENST00000608287 OR2V2Q96R30 315 aa16.16■□□□□ 0.18
SGMS1-208ENST00000608287 PKP2Q99959 881 aa16.16■□□□□ 0.18
SGMS1-208ENST00000608287 GABARAPL1Q9H0R8 117 aa16.16■□□□□ 0.18
SGMS1-208ENST00000608287 H0YL77 283 aa16.15■□□□□ 0.18
SGMS1-208ENST00000608287 NAA10P41227 235 aaPredicted RBP16.15■□□□□ 0.18
SGMS1-208ENST00000608287 PRKDCP78527 4128 aaKnown RBP16.15■□□□□ 0.18
SGMS1-208ENST00000608287 HNRNPA0Q13151 305 aaKnown RBP16.15■□□□□ 0.18
SGMS1-208ENST00000608287 APOFQ13790 326 aa16.15■□□□□ 0.18
SGMS1-208ENST00000608287 KPNB1Q14974 876 aaKnown RBP16.15■□□□□ 0.18
SGMS1-208ENST00000608287 SLC35D3Q5M8T2 416 aa16.15■□□□□ 0.18
SGMS1-208ENST00000608287 KDM4DQ6B0I6 523 aa16.15■□□□□ 0.18
SGMS1-208ENST00000608287 C17orf107Q6ZR85 190 aa16.15■□□□□ 0.18
SGMS1-208ENST00000608287 OR2AE1Q8NHA4 323 aa16.15■□□□□ 0.18
SGMS1-208ENST00000608287 RNF133Q8WVZ7 376 aa16.15■□□□□ 0.18
SGMS1-208ENST00000608287 DVL3Q92997 716 aaPredicted RBP16.15■□□□□ 0.18
SGMS1-208ENST00000608287 CENPNQ96H22 339 aaPredicted RBP16.15■□□□□ 0.18
SGMS1-208ENST00000608287 SLC30A2Q9BRI3 323 aa16.15■□□□□ 0.18
SGMS1-208ENST00000608287 PRRG3Q9BZD7 231 aa16.15■□□□□ 0.18
SGMS1-208ENST00000608287 TOR3AQ9H497 397 aa16.15■□□□□ 0.18
SGMS1-208ENST00000608287 TMEM100Q9NV29 134 aa16.15■□□□□ 0.18
SGMS1-208ENST00000608287 PPP1R3CQ9UQK1 317 aa16.15■□□□□ 0.18
SGMS1-208ENST00000608287 MMP24Q9Y5R2 645 aa16.15■□□□□ 0.18
SGMS1-208ENST00000608287 PPIAL4EA0A075B759 164 aa16.14■□□□□ 0.17
SGMS1-208ENST00000608287 PPIAL4CA0A0B4J2A2 164 aa16.14■□□□□ 0.17
SGMS1-208ENST00000608287 ISPDA4D126 451 aa16.14■□□□□ 0.17
SGMS1-208ENST00000608287 C5orf63A6NC05 138 aa16.14■□□□□ 0.17
SGMS1-208ENST00000608287 PPIAL4DF5H284 164 aa16.14■□□□□ 0.17
SGMS1-208ENST00000608287 ANXA2P07355 339 aaKnown RBP16.14■□□□□ 0.17
SGMS1-208ENST00000608287 LYNP07948 512 aa16.14■□□□□ 0.17
SGMS1-208ENST00000608287 PPIAL4FP0DN26 164 aa16.14■□□□□ 0.17
SGMS1-208ENST00000608287 SLC2A5P22732 501 aa16.14■□□□□ 0.17
SGMS1-208ENST00000608287 ANOS1P23352 680 aa16.14■□□□□ 0.17
SGMS1-208ENST00000608287 CX3CR1P49238 355 aa16.14■□□□□ 0.17
SGMS1-208ENST00000608287 ACTR3P61158 418 aa16.14■□□□□ 0.17
SGMS1-208ENST00000608287 ZNF92Q03936 586 aa16.14■□□□□ 0.17
SGMS1-208ENST00000608287 GLYATL3Q5SZD4 288 aa16.14■□□□□ 0.17
SGMS1-208ENST00000608287 OTOSQ8NHW6 89 aa16.14■□□□□ 0.17
SGMS1-208ENST00000608287 THEM6Q8WUY1 208 aa16.14■□□□□ 0.17
SGMS1-208ENST00000608287 SPRYD4Q8WW59 207 aaPredicted RBP16.14■□□□□ 0.17
SGMS1-208ENST00000608287 AMELYQ99218 206 aa16.14■□□□□ 0.17
SGMS1-208ENST00000608287 TMEM106BQ9NUM4 274 aa16.14■□□□□ 0.17
SGMS1-208ENST00000608287 DCAF16Q9NXF7 216 aa16.14■□□□□ 0.17
SGMS1-208ENST00000608287 NUP50Q9UKX7 468 aa16.14■□□□□ 0.17
SGMS1-208ENST00000608287 OAZ3Q9UMX2 235 aa16.14■□□□□ 0.17
SGMS1-208ENST00000608287 GGT3PA6NGU5 568 aa16.13■□□□□ 0.17
SGMS1-208ENST00000608287 SAC3D1A6NKF1 404 aa16.13■□□□□ 0.17
SGMS1-208ENST00000608287 TIMM23O14925 209 aa16.13■□□□□ 0.17
SGMS1-208ENST00000608287 MLNRO43193 412 aa16.13■□□□□ 0.17
SGMS1-208ENST00000608287 TBX1O43435 398 aa16.13■□□□□ 0.17
SGMS1-208ENST00000608287 PRKYO43930 277 aa16.13■□□□□ 0.17
SGMS1-208ENST00000608287 IGHV2-5P01817 119 aa16.13■□□□□ 0.17
SGMS1-208ENST00000608287 H2BFMP0C1H6 154 aa16.13■□□□□ 0.17
SGMS1-208ENST00000608287 EPHA2P29317 976 aa16.13■□□□□ 0.17
SGMS1-208ENST00000608287 RBMXP38159 391 aaKnown RBP16.13■□□□□ 0.17
SGMS1-208ENST00000608287 SRP9P49458 86 aaKnown RBP16.13■□□□□ 0.17
SGMS1-208ENST00000608287 ZNF771Q7L3S4 317 aaPredicted RBP16.13■□□□□ 0.17
SGMS1-208ENST00000608287 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.13■□□□□ 0.17
SGMS1-208ENST00000608287 ZNF454Q8N9F8 522 aa16.13■□□□□ 0.17
SGMS1-208ENST00000608287 MEGF10Q96KG7 1140 aa16.13■□□□□ 0.17
SGMS1-208ENST00000608287 CIB1Q99828 191 aa16.13■□□□□ 0.17
SGMS1-208ENST00000608287 GAL3ST1Q99999 423 aa16.13■□□□□ 0.17
SGMS1-208ENST00000608287 DNAJC27Q9NZQ0 273 aa16.13■□□□□ 0.17
SGMS1-208ENST00000608287 ENOPH1Q9UHY7 261 aa16.13■□□□□ 0.17
SGMS1-208ENST00000608287 IGHV3-64DA0A0J9YX35 117 aa16.12■□□□□ 0.17
SGMS1-208ENST00000608287 ZAR1LA6NP61 321 aa16.12■□□□□ 0.17
SGMS1-208ENST00000608287 CD300LBA8K4G0 201 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms