RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 PLAC9Q5JTB6 97 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 RAB12Q6IQ22 244 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 C1QL2Q7Z5L3 287 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 GTPBP8Q8N3Z3 284 aaPredicted RBP10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 ADPRHL1Q8NDY3 354 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 OR10R2Q8NGX6 335 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 SLC25A43Q8WUT9 341 aaPredicted RBP10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 CCDC107Q8WV48 283 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 GPER1Q99527 375 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 UQCC2Q9BRT2 126 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 LPAR5Q9H1C0 372 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 NARFLQ9H6Q4 476 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 WDR54Q9H977 334 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 RDH8Q9NYR8 311 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 TRAV14DV4A0A0A6YYC5 116 aa10.4□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 A0A0G2JMM0 328 aa10.4□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 A0A1W2PPB8 328 aa10.4□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 A0A1W2PRS3 328 aa10.4□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 TMEM14DPA8MWL7 114 aa10.4□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 KIR3DP1A8MWS1 328 aa10.4□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 TNFSF11O14788 317 aa10.4□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 F10P00742 488 aa10.4□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 RRASP10301 218 aa10.4□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 PPP1R1AQ13522 171 aa10.4□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 TRIM61Q5EBN2 209 aa10.4□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 ADAD2Q8NCV1 583 aaKnown RBP10.4□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 CASTOR1Q8WTX7 329 aa10.4□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 CXorf58Q96LI9 332 aa10.4□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 C1orf147Q96MC9 270 aaPredicted RBP10.4□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 DMRTA2Q96SC8 542 aa10.4□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 EDEM2Q9BV94 578 aa10.4□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 MFFQ9GZY8 342 aa10.4□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 IFT46Q9NQC8 304 aa10.4□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 PISDQ9UG56 409 aa10.4□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 ZSCAN5BA6NJL1 495 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 FAM25EA8MYX2 175 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 SPDEFO95238 335 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 MELTFP08582 738 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 AKR1C4P17516 323 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 ADH6P28332 368 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 AVPR2P30518 371 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 CSNK1A1P48729 337 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 IKZF1Q13422 519 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 ATXN7L3Q14CW9 347 aaPredicted RBP10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 AANATQ16613 207 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 OPN5Q6U736 354 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 RPS19BP1Q86WX3 136 aaKnown RBP10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 BEST3Q8N1M1 668 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 OR10K1Q8NGX5 313 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 ST8SIA4Q92187 359 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 ZBTB8AQ96BR9 441 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 LYZL4Q96KX0 146 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 FN3KRPQ9HA64 309 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 ZNF224Q9NZL3 707 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 PLEKHA6Q9Y2H5 1048 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 DOCK7Q96N67 2140 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 PMS2P1A4D2B8 440 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 HMSDA8MTL9 139 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 DISC1C4P0D8 188 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 KCNAB3O43448 404 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 STK17BO94768 372 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 LIFP15018 202 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 CD34P28906 385 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 SSR4P51571 173 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 TMEM50BP56557 158 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 BEX5Q5H9J7 111 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 ANGPTL6Q8NI99 470 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 TECTAO75443 2155 aa10.39□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 DNAJC13O75165 2243 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 NSG1A0A0A6YYJ2 146 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 A0A0J9YW62 118 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 C9J4A7 227 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 TLX3O43711 291 aaPredicted RBP10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 RP2O75695 350 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 CRTAPO75718 401 aaPredicted RBP10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 RAD51DO75771 328 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 CD63P08962 238 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 VAMP1P23763 118 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 GUCA1AP43080 201 aaPredicted RBP10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 RSPO1Q2MKA7 263 aaPredicted RBP10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 YRDCQ86U90 279 aaKnown RBP10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 PGAM5Q96HS1 289 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 HPF1Q9NWY4 346 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 DKKL1Q9UK85 242 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 NXT1Q9UKK6 140 aaKnown RBP10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 FREM1Q5H8C1 2179 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 DOCK10Q96BY6 2186 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 OR5H14A6NHG9 310 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 NPIPA2E9PIF3 369 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 NPIPA3F8WFD2 350 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 NTN3O00634 580 aaPredicted RBP10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 CDC14BO60729 498 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 ERCC1P07992 297 aaPredicted RBP10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 FAHP16930 419 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 C4BPBP20851 252 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 CASRP41180 1078 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 GMFBP60983 142 aa10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 ZFP36L1Q07352 338 aaKnown RBP10.38□□□□□ -0.75
HMGN3-AS1-201ENST00000604516 CLPPQ16740 277 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms