RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 CHI3L1P36222 383 aaPredicted RBP4.22□□□□□ -1.73
LINC01109-201ENST00000603837 ARR3P36575 388 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 P2RY2P41231 377 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 RAB9AP51151 201 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 CAV2P51636 162 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 EFNB1P98172 346 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 TEAD2Q15562 447 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 UBE2V2Q15819 145 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 FBLN7Q53RD9 439 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 ZNF789Q5FWF6 425 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 HENMT1Q5T8I9 393 aaKnown RBP4.22□□□□□ -1.73
LINC01109-201ENST00000603837 DCAF12L2Q5VW00 463 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 DGAT2L7PQ6IED9 249 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 RHBDD2Q6NTF9 364 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 CALHM1Q8IU99 346 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 SLC5A8Q8N695 610 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 SLC35G3Q8N808 338 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 OR10G2Q8NGC3 310 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 OR6N1Q8NGY5 312 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 OR14K1Q8NGZ2 314 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 CLEC4CQ8WTT0 213 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 PTPMT1Q8WUK0 201 aaPredicted RBP4.22□□□□□ -1.73
LINC01109-201ENST00000603837 HPSE2Q8WWQ2 592 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 TMEM234Q8WY98 164 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 TMEM159Q96B96 161 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 ABHD6Q9BV23 337 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 TBL1XR1Q9BZK7 514 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 ARV1Q9H2C2 271 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 APOBEC3GQ9HC16 384 aaKnown RBP4.22□□□□□ -1.73
LINC01109-201ENST00000603837 DNAJC27Q9NZQ0 273 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 MIA3Q5JRA6 1907 aa4.22□□□□□ -1.73
LINC01109-201ENST00000603837 LOC105371242A0A075B767 164 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 KCNE1BA0A087WTH5 132 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.21□□□□□ -1.74
LINC01109-201ENST00000603837 MAGEB17A8MXT2 336 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 SNAI1O95863 264 aaPredicted RBP4.21□□□□□ -1.74
LINC01109-201ENST00000603837 C4BPAP04003 597 aaKnown RBP4.21□□□□□ -1.74
LINC01109-201ENST00000603837 OR8U9P0C7N5 309 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 ITPKBP27987 946 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 UQCRFS1P47985 274 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 TAS2R38P59533 333 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 ZNF345Q14585 488 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 RHEBQ15382 184 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 C2orf68Q2NKX9 166 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 ZNF750Q32MQ0 723 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 ELFN2Q5R3F8 820 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 DHRS11Q6UWP2 260 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 CLEC20AQ6ZU45 233 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 FAM214BQ7L5A3 538 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 EXD3Q8N9H8 876 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 OR2AK2Q8NG84 335 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 OR4C5Q8NGB2 326 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 OR4F15Q8NGB8 312 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 OR51Q1Q8NH59 317 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 CD200R1Q8TD46 325 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 ORAOV1Q8WV07 137 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 SMPDL3BQ92485 455 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 APH1AQ96BI3 265 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 TMEM176AQ96HP8 235 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 CDKN2AIPNLQ96HQ2 116 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 KIRREL1Q96J84 757 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 PRAP1Q96NZ9 151 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 IL4I1Q96RQ9 567 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 STACQ99469 402 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 SEPT5Q99719 369 aaPredicted RBP4.21□□□□□ -1.74
LINC01109-201ENST00000603837 FAIM2Q9BWQ8 316 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 WDR76Q9H967 626 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 OR52A1Q9UKL2 312 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 ABT1Q9ULW3 272 aaKnown RBP4.21□□□□□ -1.74
LINC01109-201ENST00000603837 MEMO1Q9Y316 297 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 EXOSC1Q9Y3B2 195 aaKnown RBP4.21□□□□□ -1.74
LINC01109-201ENST00000603837 SF3B6Q9Y3B4 125 aaKnown RBP4.21□□□□□ -1.74
LINC01109-201ENST00000603837 MMP24Q9Y5R2 645 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 TRAV14DV4A0A0A6YYC5 116 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 MBLAC1A4D2B0 266 aaPredicted RBP4.21□□□□□ -1.74
LINC01109-201ENST00000603837 ANTXRLA6NF34 631 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 NAP1L6A6NFF2 107 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 DHRS7CA6NNS2 312 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 TNFRSF11BO00300 401 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 PAGE4O60829 102 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 CST4P01036 141 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 APODP05090 189 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 MMP7P09237 267 aaPredicted RBP4.21□□□□□ -1.74
LINC01109-201ENST00000603837 OR4A8P0C604 315 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 GPD1P21695 349 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 GRPRP30550 384 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 KIR3DL1P43629 444 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 UCP3P55916 312 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 OR10A3P58181 314 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 RHOAP61586 193 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 SNRPFP62306 86 aaKnown RBP4.21□□□□□ -1.74
LINC01109-201ENST00000603837 RANP62826 216 aaKnown RBP4.21□□□□□ -1.74
LINC01109-201ENST00000603837 HSF1Q00613 529 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 UBE2V1Q13404 147 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 SMIM21Q3B7S5 101 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 C6orf136Q5SQH8 315 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 AGBL4Q5VU57 503 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 CEACAM20Q6UY09 585 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 ZNF280BQ86YH2 543 aa4.21□□□□□ -1.74
LINC01109-201ENST00000603837 CMTM1Q8IZ96 169 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms