RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 UNQ9370/PRO34162Q6UXP9 181 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 OR2G2Q8NGZ5 317 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 OR10AC1Q8NH08 325 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 OR14A2Q96R54 314 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 OPN3Q9H1Y3 402 aaPredicted RBP15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 SPATA2Q9UM82 520 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 SLC5A6Q9Y289 635 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 USP24Q9UPU5 2620 aa15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 ARHGAP21Q5T5U3 1957 aa15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 OR6C65A6NJZ3 312 aa15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 FABP7O15540 132 aa15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 GSTZ1O43708 216 aaPredicted RBP15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 H2BFMP0C1H6 154 aa15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 GUCA1AP43080 201 aaPredicted RBP15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 HIST1H3AP68431 136 aa15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 GTF3C1Q12789 2109 aa15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 ALKBH1Q13686 389 aaKnown RBP15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 TSC22D1Q15714 1073 aa15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 HIST2H3PS2Q5TEC6 136 aa15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 HIST2H3AQ71DI3 136 aa15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 ZNF767PQ75MW2 155 aa15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 KCTD20Q7Z5Y7 419 aa15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 OR11H7Q8NGC8 314 aa15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 OR6K3Q8NGY3 331 aa15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 AKR7LQ8NHP1 331 aa15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 STARD4Q96DR4 205 aa15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 ZFP3Q96NJ6 502 aa15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 COPZ2Q9P299 210 aa15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 GTF2A1LQ9UNN4 478 aa15.15■□□□□ 0.02
PPFIA3-207ENST00000602716 C5orf63A6NC05 138 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 OR4C45A6NMZ5 311 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 ZNF878C9JN71 531 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 CGAP01215 116 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 DBHP09172 617 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 CST2P09228 141 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 TACSTD2P09758 323 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 TMIGD3P0DMS9 266 aaPredicted RBP15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 GLI4P10075 376 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 SLC2A1P11166 492 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 IGHV1-2P23083 117 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 GIFP27352 417 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 HIKESHIQ53FT3 197 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 RNASE12Q5GAN4 147 aaKnown RBP15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 OR2A2Q6IF42 318 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 ZNF774Q6NX45 483 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 PHF21AQ96BD5 680 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 CNTNAP3BQ96NU0 1288 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 C7orf50Q9BRJ6 194 aaKnown RBP15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 CNTNAP3Q9BZ76 1288 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 OR51J1Q9H342 316 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 AK6Q9Y3D8 172 aaKnown RBP15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 CTDSPLO15194 276 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 GPRIN2O60269 458 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 HLA-HP01893 362 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 PRKXP51817 358 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 KLF9Q13886 244 aaPredicted RBP15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 HSD17B12Q53GQ0 312 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 SFRP5Q5T4F7 317 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 CD276Q5ZPR3 534 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 SLC16A14Q7RTX9 510 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 LGALS14Q8TCE9 139 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 PHYHIPQ92561 330 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 CMTM3Q96MX0 182 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 CACNG6Q9BXT2 260 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 WNT5BQ9H1J7 359 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 FAM206AQ9NX38 181 aa15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 MRPS7Q9Y2R9 242 aaKnown RBP15.14■□□□□ 0.01
PPFIA3-207ENST00000602716 PRRG2O14669 202 aa15.13■□□□□ 0.01
PPFIA3-207ENST00000602716 LYZL6O75951 148 aa15.13■□□□□ 0.01
PPFIA3-207ENST00000602716 MMP7P09237 267 aaPredicted RBP15.13■□□□□ 0.01
PPFIA3-207ENST00000602716 MPGP29372 298 aa15.13■□□□□ 0.01
PPFIA3-207ENST00000602716 PTGER4P35408 488 aa15.13■□□□□ 0.01
PPFIA3-207ENST00000602716 HGFACQ04756 655 aa15.13■□□□□ 0.01
PPFIA3-207ENST00000602716 RSPO1Q2MKA7 263 aaPredicted RBP15.13■□□□□ 0.01
PPFIA3-207ENST00000602716 UBE2NLQ5JXB2 153 aa15.13■□□□□ 0.01
PPFIA3-207ENST00000602716 ZNF627Q7L945 461 aa15.13■□□□□ 0.01
PPFIA3-207ENST00000602716 CATSPERDQ86XM0 798 aa15.13■□□□□ 0.01
PPFIA3-207ENST00000602716 OR51A4Q8NGJ6 313 aa15.13■□□□□ 0.01
PPFIA3-207ENST00000602716 OR1K1Q8NGR3 316 aa15.13■□□□□ 0.01
PPFIA3-207ENST00000602716 SMIM4Q8WVI0 70 aa15.13■□□□□ 0.01
PPFIA3-207ENST00000602716 ORAI1Q96D31 301 aa15.13■□□□□ 0.01
PPFIA3-207ENST00000602716 G6PC2Q9NQR9 355 aa15.13■□□□□ 0.01
PPFIA3-207ENST00000602716 PLEK2Q9NYT0 353 aa15.13■□□□□ 0.01
PPFIA3-207ENST00000602716 ING4Q9UNL4 249 aa15.13■□□□□ 0.01
PPFIA3-207ENST00000602716 R4GMQ9 66 aa15.13■□□□□ 0.01
PPFIA3-207ENST00000602716 NCOA6Q14686 2063 aaPredicted RBP15.13■□□□□ 0.01
PPFIA3-207ENST00000602716 ZNF879B4DU55 563 aa15.12■□□□□ 0.01
PPFIA3-207ENST00000602716 E9PLN8 166 aa15.12■□□□□ 0.01
PPFIA3-207ENST00000602716 PIN1P1O15428 100 aa15.12■□□□□ 0.01
PPFIA3-207ENST00000602716 RAG2P55895 527 aa15.12■□□□□ 0.01
PPFIA3-207ENST00000602716 PSG4Q00888 419 aa15.12■□□□□ 0.01
PPFIA3-207ENST00000602716 DYRK1AQ13627 763 aa15.12■□□□□ 0.01
PPFIA3-207ENST00000602716 ZNF782Q6ZMW2 699 aaPredicted RBP15.12■□□□□ 0.01
PPFIA3-207ENST00000602716 NAA40Q86UY6 237 aa15.12■□□□□ 0.01
PPFIA3-207ENST00000602716 ZNF610Q8N9Z0 462 aa15.12■□□□□ 0.01
PPFIA3-207ENST00000602716 GJC3Q8NFK1 279 aa15.12■□□□□ 0.01
PPFIA3-207ENST00000602716 ZNF671Q8TAW3 534 aa15.12■□□□□ 0.01
PPFIA3-207ENST00000602716 GFI1Q99684 422 aa15.12■□□□□ 0.01
PPFIA3-207ENST00000602716 OR2H1Q9GZK4 316 aa15.12■□□□□ 0.01
PPFIA3-207ENST00000602716 NOX4Q9NPH5 578 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms