RNA–Protein interactions for RNA: ENST00000601253.5

SNRPA-209, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 519 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-209ENST00000601253 CARTPTQ16568 116 aa11.74□□□□□ -0.53
SNRPA-209ENST00000601253 TSTQ16762 297 aaKnown RBP11.74□□□□□ -0.53
SNRPA-209ENST00000601253 PLEKHG7Q6ZR37 379 aa11.74□□□□□ -0.53
SNRPA-209ENST00000601253 ACBD7Q8N6N7 88 aa11.74□□□□□ -0.53
SNRPA-209ENST00000601253 BHLHE23Q8NDY6 225 aa11.74□□□□□ -0.53
SNRPA-209ENST00000601253 OR2Z1Q8NG97 314 aa11.74□□□□□ -0.53
SNRPA-209ENST00000601253 APH1BQ8WW43 257 aa11.74□□□□□ -0.53
SNRPA-209ENST00000601253 NRG4Q8WWG1 115 aa11.74□□□□□ -0.53
SNRPA-209ENST00000601253 LGALS12Q96DT0 336 aa11.74□□□□□ -0.53
SNRPA-209ENST00000601253 MRPL48Q96GC5 212 aaKnown RBP11.74□□□□□ -0.53
SNRPA-209ENST00000601253 REEP6Q96HR9 211 aa11.74□□□□□ -0.53
SNRPA-209ENST00000601253 TBX5Q99593 518 aa11.74□□□□□ -0.53
SNRPA-209ENST00000601253 TTTY10Q9BZA0 68 aa11.74□□□□□ -0.53
SNRPA-209ENST00000601253 TMEM100Q9NV29 134 aa11.74□□□□□ -0.53
SNRPA-209ENST00000601253 MRPS18AQ9NVS2 196 aaKnown RBP11.74□□□□□ -0.53
SNRPA-209ENST00000601253 FAM206AQ9NX38 181 aa11.74□□□□□ -0.53
SNRPA-209ENST00000601253 MRPL15Q9P015 296 aaKnown RBP11.74□□□□□ -0.53
SNRPA-209ENST00000601253 AASSQ9UDR5 926 aa11.74□□□□□ -0.53
SNRPA-209ENST00000601253 IL19Q9UHD0 177 aa11.74□□□□□ -0.53
SNRPA-209ENST00000601253 NUFIP1Q9UHK0 495 aaKnown RBP11.74□□□□□ -0.53
SNRPA-209ENST00000601253 MRM2Q9UI43 246 aaKnown RBP11.74□□□□□ -0.53
SNRPA-209ENST00000601253 IGHV1-69-2A0A0G2JMI3 117 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 A0A0U1RQV5 110 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 hCG_38984A0A1B0GV85 526 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 DAPL1A0PJW8 107 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 METTL15A6NJ78 407 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 VWC2LB2RUY7 222 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 RNF223E7ERA6 249 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 WBP4O75554 376 aaKnown RBP11.73□□□□□ -0.53
SNRPA-209ENST00000601253 RP2O75695 350 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 CLIC3O95833 236 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 F8P00451 2351 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 TNFRSF1AP19438 455 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 NR4A2P43354 598 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 TMEM33P57088 247 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 ISL1P61371 349 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 FAM3AP98173 230 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 RIN1Q13671 783 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 KLHL22Q53GT1 634 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 ZNF684Q5T5D7 378 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 SSX6Q7RTT6 188 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 KCTD20Q7Z5Y7 419 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 KLBQ86Z14 1044 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 EGFL6Q8IUX8 553 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 C8orf59Q8N0T1 100 aaPredicted RBP11.73□□□□□ -0.53
SNRPA-209ENST00000601253 FTMTQ8N4E7 242 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 TFAP2CQ92754 450 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 INPP5EQ9NRR6 644 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 ZNF319Q9P2F9 582 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 R4GMQ9 66 aa11.73□□□□□ -0.53
SNRPA-209ENST00000601253 IRGMA1A4Y4 181 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 LOC110117498-PIK3R3F6TDL0 507 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 GMDSO60547 372 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 LILRA1O75019 489 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 SRSF10O75494 262 aaKnown RBP11.72□□□□□ -0.53
SNRPA-209ENST00000601253 ATP6V1G2O95670 118 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 IGHA1P01876 353 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 INHBBP09529 407 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 TACSTD2P09758 323 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 SRP9P49458 86 aaKnown RBP11.72□□□□□ -0.53
SNRPA-209ENST00000601253 GSK3AP49840 483 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 ACTA2P62736 377 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 ACTG2P63267 376 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 ZNF85Q03923 595 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 LOXL1Q08397 574 aaPredicted RBP11.72□□□□□ -0.53
SNRPA-209ENST00000601253 OR8B8Q15620 311 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 HFEQ30201 348 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 FAM220AQ7Z4H9 259 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 CIARTQ8N365 385 aaPredicted RBP11.72□□□□□ -0.53
SNRPA-209ENST00000601253 CELF2-AS1Q8N7Q2 184 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 YIPF7Q8N8F6 280 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 CSNK2A3Q8NEV1 391 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 OR8B12Q8NGG6 310 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 OR56B2PQ8NGI1 322 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 YIPF5Q969M3 257 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 PBOV1Q9GZY1 135 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 SNX5Q9Y5X3 404 aa11.72□□□□□ -0.53
SNRPA-209ENST00000601253 A0A096LNT2 108 aa11.71□□□□□ -0.53
SNRPA-209ENST00000601253 ANKRD30BLA7E2S9 258 aa11.71□□□□□ -0.53
SNRPA-209ENST00000601253 LYNX1G3V0Z9 82 aa11.71□□□□□ -0.53
SNRPA-209ENST00000601253 IFNL4K9M1U5 179 aa11.71□□□□□ -0.53
SNRPA-209ENST00000601253 MAGEB4O15481 346 aaPredicted RBP11.71□□□□□ -0.53
SNRPA-209ENST00000601253 MLNRO43193 412 aa11.71□□□□□ -0.53
SNRPA-209ENST00000601253 PNPP00491 289 aa11.71□□□□□ -0.53
SNRPA-209ENST00000601253 LYNX1P0DP58 116 aa11.71□□□□□ -0.53
SNRPA-209ENST00000601253 ATP6V1B1P15313 513 aa11.71□□□□□ -0.53
SNRPA-209ENST00000601253 USF1P22415 310 aaPredicted RBP11.71□□□□□ -0.53
SNRPA-209ENST00000601253 COL8A2P25067 703 aa11.71□□□□□ -0.53
SNRPA-209ENST00000601253 PRSS12P56730 875 aa11.71□□□□□ -0.53
SNRPA-209ENST00000601253 SLC3A1Q07837 685 aa11.71□□□□□ -0.53
SNRPA-209ENST00000601253 MFGE8Q08431 387 aaPredicted RBP11.71□□□□□ -0.53
SNRPA-209ENST00000601253 GFOD2Q3B7J2 385 aa11.71□□□□□ -0.53
SNRPA-209ENST00000601253 CDONQ4KMG0 1287 aa11.71□□□□□ -0.53
SNRPA-209ENST00000601253 BCL2L15Q5TBC7 163 aa11.71□□□□□ -0.53
SNRPA-209ENST00000601253 LIPNQ5VXI9 398 aa11.71□□□□□ -0.53
SNRPA-209ENST00000601253 BIVMQ86UB2 503 aa11.71□□□□□ -0.53
SNRPA-209ENST00000601253 ELMOD2Q8IZ81 293 aa11.71□□□□□ -0.53
SNRPA-209ENST00000601253 SPERTQ8NA61 448 aa11.71□□□□□ -0.53
SNRPA-209ENST00000601253 OR10AD1Q8NGE0 317 aa11.71□□□□□ -0.53
SNRPA-209ENST00000601253 CNIH3Q8TBE1 160 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms