RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 MBNL2Q5VZF2 373 aaKnown RBP10.01□□□□□ -0.81
CHMP2A-207ENST00000600804 RPL22L1Q6P5R6 122 aaKnown RBP10.01□□□□□ -0.81
CHMP2A-207ENST00000600804 SLC22A25Q6T423 547 aa10.01□□□□□ -0.81
CHMP2A-207ENST00000600804 CLEC9AQ6UXN8 241 aa10.01□□□□□ -0.81
CHMP2A-207ENST00000600804 FBXW12Q6X9E4 464 aa10.01□□□□□ -0.81
CHMP2A-207ENST00000600804 RFPL4BQ6ZWI9 263 aa10.01□□□□□ -0.81
CHMP2A-207ENST00000600804 KRT74Q7RTS7 529 aa10.01□□□□□ -0.81
CHMP2A-207ENST00000600804 CCDC54Q8NEL0 328 aa10.01□□□□□ -0.81
CHMP2A-207ENST00000600804 TSPAN14Q8NG11 270 aa10.01□□□□□ -0.81
CHMP2A-207ENST00000600804 TMEM171Q8WVE6 324 aa10.01□□□□□ -0.81
CHMP2A-207ENST00000600804 TTTY10Q9BZA0 68 aa10.01□□□□□ -0.81
CHMP2A-207ENST00000600804 CCDC90BQ9GZT6 254 aa10.01□□□□□ -0.81
CHMP2A-207ENST00000600804 PBOV1Q9GZY1 135 aa10.01□□□□□ -0.81
CHMP2A-207ENST00000600804 OR10A2Q9H208 303 aa10.01□□□□□ -0.81
CHMP2A-207ENST00000600804 OR52A1Q9UKL2 312 aa10.01□□□□□ -0.81
CHMP2A-207ENST00000600804 LOC390937A0A1W2PQ73 354 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 MAGEA13PA6NCF6 341 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 TMEM212A6NML5 194 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 OR4C45A6NMZ5 311 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 VSTM5A8MXK1 200 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 PLPP2O43688 288 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 NGFP01138 241 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 ANXA2P07355 339 aaKnown RBP10□□□□□ -0.81
CHMP2A-207ENST00000600804 ATP6V1B1P15313 513 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 ZNF250P15622 560 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 CCL1P22362 96 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 EVX1P49640 407 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 CDH15P55291 814 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 PPP1CBP62140 327 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 MFGE8Q08431 387 aaPredicted RBP10□□□□□ -0.81
CHMP2A-207ENST00000600804 SPOCK1Q08629 439 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 MLLT11Q13015 90 aaPredicted RBP10□□□□□ -0.81
CHMP2A-207ENST00000600804 MALLQ13021 153 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 ALKBH1Q13686 389 aaKnown RBP10□□□□□ -0.81
CHMP2A-207ENST00000600804 CDK5R1Q15078 307 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 ZNF672Q499Z4 452 aaPredicted RBP10□□□□□ -0.81
CHMP2A-207ENST00000600804 DMKNQ6E0U4 476 aaPredicted RBP10□□□□□ -0.81
CHMP2A-207ENST00000600804 ZNF704Q6ZNC4 412 aaPredicted RBP10□□□□□ -0.81
CHMP2A-207ENST00000600804 ZNF367Q7RTV3 350 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 NAA40Q86UY6 237 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 PRSS35Q8N3Z0 413 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 PLPP7Q8NBV4 271 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 OR8B12Q8NGG6 310 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 GATAD2BQ8WXI9 593 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 AKAP1Q92667 903 aaKnown RBP eCLIP10□□□□□ -0.81
CHMP2A-207ENST00000600804 PIK3IP1Q96FE7 263 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 MARS2Q96GW9 593 aaKnown RBP10□□□□□ -0.81
CHMP2A-207ENST00000600804 PGAM5Q96HS1 289 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 COX4I2Q96KJ9 171 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 HS3ST6Q96QI5 342 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 REPIN1Q9BWE0 567 aaKnown RBP10□□□□□ -0.81
CHMP2A-207ENST00000600804 CA10Q9NS85 328 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 FRRS1LQ9P0K9 344 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 STARD10Q9Y365 291 aa10□□□□□ -0.81
CHMP2A-207ENST00000600804 IGLV3-9A0A075B6K5 115 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 DHRS7CA6NNS2 312 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 E9PI62 339 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 RPP14O95059 124 aaKnown RBP9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 LALBAP00709 142 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 TTRP02766 147 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 UBCP0CG48 685 aaKnown RBP9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 RAC2P15153 192 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 JUNBP17275 347 aaPredicted RBP9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 MAP2K4P45985 399 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 NANOS3P60323 173 aaKnown RBP9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 SNTB2Q13425 540 aaKnown RBP9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 TPBGQ13641 420 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 EFNB3Q15768 340 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 SNAI3Q3KNW1 292 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 ZNF718Q3SXZ3 478 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 WDR38Q5JTN6 314 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 SYT6Q5T7P8 510 aaPredicted RBP9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 BCL2L15Q5TBC7 163 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 TMEM244Q5VVB8 128 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 XAF1Q6GPH4 301 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 RGS7BPQ6MZT1 257 aaPredicted RBP9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 FAM57BQ71RH2 274 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 KLBQ86Z14 1044 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 KBTBD8Q8NFY9 601 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 OR1J1Q8NGS3 322 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 LILRB1Q8NHL6 650 aaPredicted RBP9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 ABHD4Q8TB40 342 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 SGK3Q96BR1 496 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 SMIM19Q96E16 107 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 OR5M11Q96RB7 305 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 MGLLQ99685 303 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 DHRS9Q9BPW9 319 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 VCX3AQ9NNX9 186 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 ZNF319Q9P2F9 582 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 FBXO9Q9UK97 447 aaPredicted RBP9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 USF3Q68DE3 2245 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 NBEAL1Q6ZS30 2694 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 ANK2Q01484 3957 aa9.99□□□□□ -0.81
CHMP2A-207ENST00000600804 E7EQL1 145 aa9.98□□□□□ -0.81
CHMP2A-207ENST00000600804 HS3ST1O14792 307 aa9.98□□□□□ -0.81
CHMP2A-207ENST00000600804 GPRIN2O60269 458 aa9.98□□□□□ -0.81
CHMP2A-207ENST00000600804 IGHV3-13P01766 116 aa9.98□□□□□ -0.81
CHMP2A-207ENST00000600804 FAM157BP0CG42 384 aa9.98□□□□□ -0.81
CHMP2A-207ENST00000600804 SMIM18P0DKX4 95 aa9.98□□□□□ -0.81
CHMP2A-207ENST00000600804 SLC2A1P11166 492 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 209 ms