RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 BABAM2Q9NXR7 383 aa17.13■□□□□ 0.33
SHKBP1-222ENST00000600320 LAMP3Q9UQV4 416 aa17.13■□□□□ 0.33
SHKBP1-222ENST00000600320 A0A1B0GTI1 187 aa17.12■□□□□ 0.33
SHKBP1-222ENST00000600320 P2RY10O00398 339 aa17.12■□□□□ 0.33
SHKBP1-222ENST00000600320 LILRA1O75019 489 aa17.12■□□□□ 0.33
SHKBP1-222ENST00000600320 IGHV3-13P01766 116 aa17.12■□□□□ 0.33
SHKBP1-222ENST00000600320 KITLGP21583 273 aa17.12■□□□□ 0.33
SHKBP1-222ENST00000600320 TGM4P49221 684 aa17.12■□□□□ 0.33
SHKBP1-222ENST00000600320 KLF3P57682 345 aaPredicted RBP17.12■□□□□ 0.33
SHKBP1-222ENST00000600320 FAM3AP98173 230 aa17.12■□□□□ 0.33
SHKBP1-222ENST00000600320 TNK1Q13470 666 aa17.12■□□□□ 0.33
SHKBP1-222ENST00000600320 ODF4Q2M2E3 257 aa17.12■□□□□ 0.33
SHKBP1-222ENST00000600320 AGAP6Q5VW22 663 aa17.12■□□□□ 0.33
SHKBP1-222ENST00000600320 PGAP1Q75T13 922 aa17.12■□□□□ 0.33
SHKBP1-222ENST00000600320 OR51E1Q8TCB6 317 aa17.12■□□□□ 0.33
SHKBP1-222ENST00000600320 RPS4Y2Q8TD47 263 aa17.12■□□□□ 0.33
SHKBP1-222ENST00000600320 GTF3AQ92664 365 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-222ENST00000600320 MND1Q9BWT6 205 aa17.12■□□□□ 0.33
SHKBP1-222ENST00000600320 GPR84Q9NQS5 396 aa17.12■□□□□ 0.33
SHKBP1-222ENST00000600320 CBLN4Q9NTU7 201 aa17.12■□□□□ 0.33
SHKBP1-222ENST00000600320 TAAR3PQ9P1P4 343 aa17.12■□□□□ 0.33
SHKBP1-222ENST00000600320 A0A0U1RQV5 110 aa17.11■□□□□ 0.33
SHKBP1-222ENST00000600320 A0A1W2PPW3 197 aa17.11■□□□□ 0.33
SHKBP1-222ENST00000600320 OR4C45A6NMZ5 311 aa17.11■□□□□ 0.33
SHKBP1-222ENST00000600320 B9A039 149 aa17.11■□□□□ 0.33
SHKBP1-222ENST00000600320 MRPS14O60783 128 aaKnown RBP17.11■□□□□ 0.33
SHKBP1-222ENST00000600320 ALDH3B1P43353 468 aa17.11■□□□□ 0.33
SHKBP1-222ENST00000600320 EVX1P49640 407 aa17.11■□□□□ 0.33
SHKBP1-222ENST00000600320 MRPL28Q13084 256 aaKnown RBP17.11■□□□□ 0.33
SHKBP1-222ENST00000600320 CDK5R1Q15078 307 aa17.11■□□□□ 0.33
SHKBP1-222ENST00000600320 PAMR1Q6UXH9 720 aa17.11■□□□□ 0.33
SHKBP1-222ENST00000600320 RDH10Q8IZV5 341 aa17.11■□□□□ 0.33
SHKBP1-222ENST00000600320 SPARTQ8N0X7 666 aa17.11■□□□□ 0.33
SHKBP1-222ENST00000600320 OR5AS1Q8N127 324 aa17.11■□□□□ 0.33
SHKBP1-222ENST00000600320 FAM71F1Q96KD3 344 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-222ENST00000600320 RGCCQ9H4X1 137 aa17.11■□□□□ 0.33
SHKBP1-222ENST00000600320 FAIMQ9NVQ4 179 aa17.11■□□□□ 0.33
SHKBP1-222ENST00000600320 DSCAMO60469 2012 aa17.11■□□□□ 0.33
SHKBP1-222ENST00000600320 CACNA1DQ01668 2161 aa17.11■□□□□ 0.33
SHKBP1-222ENST00000600320 CD300LBA8K4G0 201 aa17.1■□□□□ 0.33
SHKBP1-222ENST00000600320 IQCF6A8MYZ5 107 aa17.1■□□□□ 0.33
SHKBP1-222ENST00000600320 H3BSH0 61 aa17.1■□□□□ 0.33
SHKBP1-222ENST00000600320 OGG1O15527 345 aa17.1■□□□□ 0.33
SHKBP1-222ENST00000600320 TIMM8AO60220 97 aaPredicted RBP17.1■□□□□ 0.33
SHKBP1-222ENST00000600320 CCR9P51686 369 aa17.1■□□□□ 0.33
SHKBP1-222ENST00000600320 SPHARQ15513 63 aa17.1■□□□□ 0.33
SHKBP1-222ENST00000600320 TBCEQ15813 527 aaPredicted RBP17.1■□□□□ 0.33
SHKBP1-222ENST00000600320 ZNF773Q6PK81 442 aa17.1■□□□□ 0.33
SHKBP1-222ENST00000600320 OR56B2PQ8NGI1 322 aa17.1■□□□□ 0.33
SHKBP1-222ENST00000600320 ACOT13Q9NPJ3 140 aa17.1■□□□□ 0.33
SHKBP1-222ENST00000600320 PLEKHA6Q9Y2H5 1048 aa17.1■□□□□ 0.33
SHKBP1-222ENST00000600320 HRNRQ86YZ3 2850 aaPredicted RBP17.1■□□□□ 0.33
SHKBP1-222ENST00000600320 GGT3PA6NGU5 568 aa17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 CD53P19397 219 aa17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 CCL1P22362 96 aa17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 ACKR3P25106 362 aa17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 GSK3AP49840 483 aa17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 MMP15P51511 669 aa17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 SELENOVP59797 346 aa17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 EMX1Q04741 257 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 MED22Q15528 200 aa17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 RPL22L1Q6P5R6 122 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 Q6ZR03 302 aa17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 COMMD2Q86X83 199 aa17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 BHLHE23Q8NDY6 225 aa17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 OR10AC1Q8NH08 325 aa17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 HAVCR2Q8TDQ0 301 aa17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 LURAP1Q96LR2 239 aa17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 PDCD1LG2Q9BQ51 273 aa17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 OPA3Q9H6K4 179 aa17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 ZNF696Q9H7X3 374 aa17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 TRIM36Q9NQ86 728 aa17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 AKAP6Q13023 2319 aa17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 UNC79Q9P2D8 2635 aa17.09■□□□□ 0.33
SHKBP1-222ENST00000600320 ARFGEF3Q5TH69 2177 aa17.08■□□□□ 0.33
SHKBP1-222ENST00000600320 TRBV2A0A0J9YWF9 115 aa17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 PNMA8CA0A1B0GUJ8 204 aa17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 LOC107986453A0A1B0GWG9 222 aa17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 ZSCAN5BA6NJL1 495 aa17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 ZFPL1O95159 310 aa17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 TNFAIP8O95379 198 aa17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 PCMT1P22061 227 aa17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 CFL1P23528 166 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 SNRPD2P62316 118 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 OR8B8Q15620 311 aa17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 NKPD1Q17RQ9 610 aa17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 CCDC58Q4VC31 144 aa17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 DMKNQ6E0U4 476 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 Q6ZSR3 168 aa17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 ZCCHC24Q8N2G6 241 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 PLPP7Q8NBV4 271 aa17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 OR14K1Q8NGZ2 314 aa17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 CCL19Q99731 98 aa17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 CACNG6Q9BXT2 260 aa17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 MSL2Q9HCI7 577 aa17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 ZNF391Q9UJN7 358 aa17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 FBN2P35556 2912 aa17.08■□□□□ 0.32
SHKBP1-222ENST00000600320 M0R233 179 aa17.07■□□□□ 0.32
SHKBP1-222ENST00000600320 LMX1BO60663 402 aa17.07■□□□□ 0.32
SHKBP1-222ENST00000600320 UBCP0CG48 685 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms