RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 ENOPH1Q9UHY7 261 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 BLOC1S6Q9UL45 172 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 A0A0G2JMP0 313 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 A0A0X1KG70 313 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 F5H5P2 479 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 MRPS14O60783 128 aaKnown RBP11.58□□□□□ -0.56
SCAF1-203ENST00000598359 VENTXO95231 258 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 CYB5R3P00387 301 aaPredicted RBP11.58□□□□□ -0.56
SCAF1-203ENST00000598359 LCATP04180 440 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 HLA-DPB1P04440 258 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 CLUP10909 449 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 ZNF823P16415 610 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 TNFRSF1AP19438 455 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 POLR2IP36954 125 aaKnown RBP11.58□□□□□ -0.56
SCAF1-203ENST00000598359 MMP16P51512 607 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 DCAF12L2Q5VW00 463 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 LIPNQ5VXI9 398 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 COLCA1Q6ZS62 124 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 LINC00471Q8N535 108 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 IQCF1Q8N6M8 205 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 ZNF511Q8NB15 262 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 OR4M2Q8NGB6 313 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 MEGF10Q96KG7 1140 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 ZNF582Q96NG8 517 aaPredicted RBP11.58□□□□□ -0.56
SCAF1-203ENST00000598359 FEVQ99581 238 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 NIPSNAP1Q9BPW8 284 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 C1QTNF5Q9BXJ0 243 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 RIBC2Q9H4K1 309 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 GCM1Q9NP62 436 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 PAPOLBQ9NRJ5 636 aaKnown RBP11.58□□□□□ -0.56
SCAF1-203ENST00000598359 PCDHB10Q9UN67 800 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 GMPPBQ9Y5P6 360 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 DYSFO75923 2080 aa11.58□□□□□ -0.56
SCAF1-203ENST00000598359 ARHGAP32A7KAX9 2087 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 VGLL3A8MV65 326 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 IQCF6A8MYZ5 107 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 TMEM178BH3BS89 294 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 J3QW42 95 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 ZNF701M0R085 212 aaPredicted RBP11.57□□□□□ -0.56
SCAF1-203ENST00000598359 SLC1A7O00341 560 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 SURF4O15260 269 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 BTG1P62324 171 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 HOXA4Q00056 320 aaPredicted RBP11.57□□□□□ -0.56
SCAF1-203ENST00000598359 GK2Q14410 553 aaPredicted RBP11.57□□□□□ -0.56
SCAF1-203ENST00000598359 FAM201AQ5SY85 155 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 RPL13AP3Q6NVV1 102 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 SPATC1Q76KD6 591 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 DCXRQ7Z4W1 244 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 MOGAT3Q86VF5 341 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 LNX2Q8N448 690 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 OR13G1Q8NGZ3 307 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 OR2T4Q8NH00 348 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 OR2AE1Q8NHA4 323 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 ST7LQ8TDW4 575 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 SLC30A2Q9BRI3 323 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 HCAR1Q9BXC0 346 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 DGCR6LQ9BY27 220 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 MED20Q9H944 212 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 OPN4Q9UHM6 478 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 N6AMT1Q9Y5N5 214 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 CEPT1Q9Y6K0 416 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 COMMD3-BMI1R4GMX3 469 aa11.57□□□□□ -0.56
SCAF1-203ENST00000598359 M0R135 149 aa11.56□□□□□ -0.56
SCAF1-203ENST00000598359 SPARCP09486 303 aa11.56□□□□□ -0.56
SCAF1-203ENST00000598359 SPI1P17947 270 aa11.56□□□□□ -0.56
SCAF1-203ENST00000598359 EPHA1P21709 976 aa11.56□□□□□ -0.56
SCAF1-203ENST00000598359 PMELP40967 661 aa11.56□□□□□ -0.56
SCAF1-203ENST00000598359 SLC6A9P48067 706 aa11.56□□□□□ -0.56
SCAF1-203ENST00000598359 TPTEP56180 551 aa11.56□□□□□ -0.56
SCAF1-203ENST00000598359 ECH1Q13011 328 aa11.56□□□□□ -0.56
SCAF1-203ENST00000598359 SNAI3Q3KNW1 292 aa11.56□□□□□ -0.56
SCAF1-203ENST00000598359 LRRC28Q86X40 367 aaPredicted RBP11.56□□□□□ -0.56
SCAF1-203ENST00000598359 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.56□□□□□ -0.56
SCAF1-203ENST00000598359 OR6K6Q8NGW6 343 aa11.56□□□□□ -0.56
SCAF1-203ENST00000598359 ZNF799Q96GE5 643 aa11.56□□□□□ -0.56
SCAF1-203ENST00000598359 NMNAT2Q9BZQ4 307 aa11.56□□□□□ -0.56
SCAF1-203ENST00000598359 YIPF3Q9GZM5 350 aa11.56□□□□□ -0.56
SCAF1-203ENST00000598359 C7orf69Q9H7B7 122 aa11.56□□□□□ -0.56
SCAF1-203ENST00000598359 PATZ1Q9HBE1 687 aaKnown RBP11.56□□□□□ -0.56
SCAF1-203ENST00000598359 MMP26Q9NRE1 261 aa11.56□□□□□ -0.56
SCAF1-203ENST00000598359 PTTG2Q9NZH5 202 aa11.56□□□□□ -0.56
SCAF1-203ENST00000598359 PCDHGB1Q9Y5G3 927 aa11.56□□□□□ -0.56
SCAF1-203ENST00000598359 FAM183AA6NL82 134 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 TRAPPC2LH3BP13 241 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 HTR1AP08908 422 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 SLC2A1P11166 492 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 PRKXP51817 358 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 ESRRGP62508 458 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 CSNK2BP67870 215 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 IL5RAQ01344 420 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 ZNF92Q03936 586 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 MALLQ13021 153 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 PRAMEF6Q5VXH4 476 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 SLC27A4Q6P1M0 643 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 MRPL21Q7Z2W9 205 aaKnown RBP11.55□□□□□ -0.56
SCAF1-203ENST00000598359 C1QL2Q7Z5L3 287 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 KLHL36Q8N4N3 616 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 SPICQ8N5J4 248 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 C19orf18Q8NEA5 215 aa11.55□□□□□ -0.56
SCAF1-203ENST00000598359 SEMA6DQ8NFY4 1073 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms