RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 PRR32B1ATL7 298 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 E9PQ18 207 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 TGFAP01135 160 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 SBK2P0C263 348 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 CA6P23280 308 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 CFL1P23528 166 aaKnown RBP11.7□□□□□ -0.54
UPF1-205ENST00000598209 HTR1FP30939 366 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 RBMXP38159 391 aaKnown RBP11.7□□□□□ -0.54
UPF1-205ENST00000598209 FAM3AP98173 230 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 ROM1Q03395 351 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 OR8G1Q15617 311 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 ZSCAN26Q16670 478 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 GFOD2Q3B7J2 385 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 FAM166AQ6J272 317 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 DEGS2Q6QHC5 323 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 PEG10Q86TG7 708 aaKnown RBP11.7□□□□□ -0.54
UPF1-205ENST00000598209 ZNF679Q8IYX0 411 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 RFLNBQ8N5W9 214 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 LINC01356Q8N9X3 169 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 OR51G2Q8NGK0 314 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 UBE2FQ969M7 185 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 POM121Q96HA1 1249 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 C1orf159Q96HA4 380 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 OR8B4Q96RC9 309 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 MBOAT4Q96T53 435 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 MNTQ99583 582 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 MROQ9BYG7 248 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 SLC22A4Q9H015 551 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 GCM1Q9NP62 436 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 CLN6Q9NWW5 311 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 MRPL15Q9P015 296 aaKnown RBP11.7□□□□□ -0.54
UPF1-205ENST00000598209 IKZF2Q9UKS7 526 aa11.7□□□□□ -0.54
UPF1-205ENST00000598209 NOP16Q9Y3C1 178 aaKnown RBP11.7□□□□□ -0.54
UPF1-205ENST00000598209 hCG_38984A0A1B0GV85 526 aa11.69□□□□□ -0.54
UPF1-205ENST00000598209 ISPDA4D126 451 aa11.69□□□□□ -0.54
UPF1-205ENST00000598209 ANKRD65E5RJM6 399 aa11.69□□□□□ -0.54
UPF1-205ENST00000598209 ZNF670-ZNF695F2Z2N8 137 aa11.69□□□□□ -0.54
UPF1-205ENST00000598209 PHYHO14832 338 aa11.69□□□□□ -0.54
UPF1-205ENST00000598209 LMX1BO60663 402 aa11.69□□□□□ -0.54
UPF1-205ENST00000598209 ZNF254O75437 659 aa11.69□□□□□ -0.54
UPF1-205ENST00000598209 DDOSTP39656 456 aa11.69□□□□□ -0.54
UPF1-205ENST00000598209 MMP16P51512 607 aa11.69□□□□□ -0.54
UPF1-205ENST00000598209 RIDAP52758 137 aaKnown RBP11.69□□□□□ -0.54
UPF1-205ENST00000598209 CDH15P55291 814 aa11.69□□□□□ -0.54
UPF1-205ENST00000598209 CXCR4P61073 352 aa11.69□□□□□ -0.54
UPF1-205ENST00000598209 LMO4P61968 165 aa11.69□□□□□ -0.54
UPF1-205ENST00000598209 GABPB1Q06547 395 aaPredicted RBP11.69□□□□□ -0.54
UPF1-205ENST00000598209 POU4F2Q12837 409 aa11.69□□□□□ -0.54
UPF1-205ENST00000598209 MAB21L1Q13394 359 aa11.69□□□□□ -0.54
UPF1-205ENST00000598209 ZNF322Q6U7Q0 402 aaPredicted RBP11.69□□□□□ -0.54
UPF1-205ENST00000598209 MOGAT3Q86VF5 341 aa11.69□□□□□ -0.54
UPF1-205ENST00000598209 OR8B12Q8NGG6 310 aa11.69□□□□□ -0.54
UPF1-205ENST00000598209 ZNF420Q8TAQ5 688 aaPredicted RBP11.69□□□□□ -0.54
UPF1-205ENST00000598209 TRUB1Q8WWH5 349 aaKnown RBP11.69□□□□□ -0.54
UPF1-205ENST00000598209 RFKQ969G6 155 aa11.69□□□□□ -0.54
UPF1-205ENST00000598209 ADAT1Q9BUB4 502 aaKnown RBP11.69□□□□□ -0.54
UPF1-205ENST00000598209 RGCCQ9H4X1 137 aa11.69□□□□□ -0.54
UPF1-205ENST00000598209 KCNS2Q9ULS6 477 aa11.69□□□□□ -0.54
UPF1-205ENST00000598209 NPTNQ9Y639 398 aa11.69□□□□□ -0.54
UPF1-205ENST00000598209 ANK3Q12955 4377 aaKnown RBP11.69□□□□□ -0.54
UPF1-205ENST00000598209 TMEM269A0A1B0GVZ9 245 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 ANKRD30BLA7E2S9 258 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 FAM157AC9JC47 383 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 TMEM178BH3BS89 294 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 IFNL4K9M1U5 179 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 GMDSO60547 372 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 CRLF1O75462 422 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 APOL3O95236 402 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 IGHV2-70P01814 119 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 DCTDP32321 178 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 CD200P41217 278 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 GSK3AP49840 483 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 TMED1Q13445 227 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 CELF2-AS1Q8N7Q2 184 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 DVL3Q92997 716 aaPredicted RBP11.68□□□□□ -0.54
UPF1-205ENST00000598209 SIGLEC11Q96RL6 698 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 TBX5Q99593 518 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 GAL3ST1Q99999 423 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 APOL4Q9BPW4 351 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 ZNF665Q9H7R5 613 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 FAM206AQ9NX38 181 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 GMPPBQ9Y5P6 360 aa11.68□□□□□ -0.54
UPF1-205ENST00000598209 NIPBLQ6KC79 2804 aaeCLIP11.68□□□□□ -0.54
UPF1-205ENST00000598209 ACOD1A6NK06 481 aa11.67□□□□□ -0.54
UPF1-205ENST00000598209 B4DSR2 109 aa11.67□□□□□ -0.54
UPF1-205ENST00000598209 MAGEB4O15481 346 aaPredicted RBP11.67□□□□□ -0.54
UPF1-205ENST00000598209 ENTPD6O75354 484 aa11.67□□□□□ -0.54
UPF1-205ENST00000598209 CYB5R3P00387 301 aaPredicted RBP11.67□□□□□ -0.54
UPF1-205ENST00000598209 IGHV2-5P01817 119 aa11.67□□□□□ -0.54
UPF1-205ENST00000598209 OR2T7P0C7T2 308 aa11.67□□□□□ -0.54
UPF1-205ENST00000598209 ANPEPP15144 967 aa11.67□□□□□ -0.54
UPF1-205ENST00000598209 ATP6V1E1P36543 226 aa11.67□□□□□ -0.54
UPF1-205ENST00000598209 PMELP40967 661 aa11.67□□□□□ -0.54
UPF1-205ENST00000598209 GATA4P43694 442 aa11.67□□□□□ -0.54
UPF1-205ENST00000598209 SNRPGP62308 76 aaKnown RBP11.67□□□□□ -0.54
UPF1-205ENST00000598209 BTG1P62324 171 aa11.67□□□□□ -0.54
UPF1-205ENST00000598209 EGR3Q06889 387 aa11.67□□□□□ -0.54
UPF1-205ENST00000598209 RCN1Q15293 331 aa11.67□□□□□ -0.54
UPF1-205ENST00000598209 ZNF829Q3KNS6 432 aaPredicted RBP11.67□□□□□ -0.54
UPF1-205ENST00000598209 SLC25A30Q5SVS4 291 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms