RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 PGM2L1Q6PCE3 622 aa12.77□□□□□ -0.37
LIG1-214ENST00000597146 ZNF841Q6ZN19 808 aa12.77□□□□□ -0.37
LIG1-214ENST00000597146 FOXL2NBQ6ZUU3 175 aa12.77□□□□□ -0.37
LIG1-214ENST00000597146 PIP4P2Q8N4L2 257 aa12.77□□□□□ -0.37
LIG1-214ENST00000597146 OR2AJ1Q8NGZ0 328 aa12.77□□□□□ -0.37
LIG1-214ENST00000597146 WDFY2Q96P53 400 aa12.77□□□□□ -0.37
LIG1-214ENST00000597146 GPX7Q96SL4 187 aaPredicted RBP12.77□□□□□ -0.37
LIG1-214ENST00000597146 NMNAT3Q96T66 252 aa12.77□□□□□ -0.37
LIG1-214ENST00000597146 FUZQ9BT04 418 aa12.77□□□□□ -0.37
LIG1-214ENST00000597146 C1orf21Q9H246 121 aa12.77□□□□□ -0.37
LIG1-214ENST00000597146 DPAGT1Q9H3H5 408 aa12.77□□□□□ -0.37
LIG1-214ENST00000597146 TAS2R1Q9NYW7 299 aa12.77□□□□□ -0.37
LIG1-214ENST00000597146 VSX1Q9NZR4 365 aaPredicted RBP12.77□□□□□ -0.37
LIG1-214ENST00000597146 SAMHD1Q9Y3Z3 626 aaKnown RBP12.77□□□□□ -0.37
LIG1-214ENST00000597146 SURF4O15260 269 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 ICMTO60725 284 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 TXNDC12O95881 172 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 SCG5P05408 212 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 T-ENOLP0DO92 83 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 ZNF823P16415 610 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 GSTM3P21266 225 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 GABRA5P31644 462 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 HMGA2P52926 109 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 MS4A2Q01362 244 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 AQP6Q13520 282 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 DNAL1Q4LDG9 190 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 OR2T5Q6IEZ7 315 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 LCN8Q6JVE9 175 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 PGBD2Q6P3X8 592 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 PTCHD4Q6ZW05 846 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 VASH1Q7L8A9 365 aaPredicted RBP12.76□□□□□ -0.37
LIG1-214ENST00000597146 C19orf18Q8NEA5 215 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 GJC3Q8NFK1 279 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 OR2T29Q8NH02 315 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 CFHR4Q92496 578 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 CLPTM1LQ96KA5 538 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 TECTBQ96PL2 329 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 SIRPDQ9H106 197 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 RPRD1BQ9NQG5 326 aaKnown RBP12.76□□□□□ -0.37
LIG1-214ENST00000597146 B9D1Q9UPM9 204 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 U3KQV3 271 aa12.76□□□□□ -0.37
LIG1-214ENST00000597146 ARPC3O15145 178 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 GASTP01350 101 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 RAP2AP10114 183 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 COX5BP10606 129 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 HIST1H1CP16403 213 aaKnown RBP12.75□□□□□ -0.37
LIG1-214ENST00000597146 KITLGP21583 273 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 TGFBR2P37173 567 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 GSSP48637 474 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 HOXA4Q00056 320 aaPredicted RBP12.75□□□□□ -0.37
LIG1-214ENST00000597146 TRAP1Q12931 704 aaKnown RBP12.75□□□□□ -0.37
LIG1-214ENST00000597146 PPP1R8Q12972 351 aaKnown RBP12.75□□□□□ -0.37
LIG1-214ENST00000597146 NSUN5P1Q3KNT7 163 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 OTPQ5XKR4 325 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 C1orf122Q6ZSJ8 110 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 MOGAT3Q86VF5 341 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 SPATA24Q86W54 205 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 OR5AS1Q8N127 324 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 GALNT4Q8N4A0 578 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 KLHDC1Q8N7A1 406 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 ATG16L2Q8NAA4 619 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 AQP11Q8NBQ7 271 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 OR5L1Q8NGL2 311 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 OR1F12Q8NHA8 337 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 CMBLQ96DG6 245 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 ASB9Q96DX5 294 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 MEGF10Q96KG7 1140 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 COG8Q96MW5 612 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 TSSK2Q96PF2 358 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 MMP28Q9H239 520 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 EGLN3Q9H6Z9 239 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 YY1AP1Q9H869 796 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 TBC1D23Q9NUY8 699 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 ZNRD1Q9P1U0 126 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 CTSZQ9UBR2 303 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 FBLN5Q9UBX5 448 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 LYVE1Q9Y5Y7 322 aa12.75□□□□□ -0.37
LIG1-214ENST00000597146 STAB2Q8WWQ8 2551 aa12.74□□□□□ -0.37
LIG1-214ENST00000597146 BTBD17A6NE02 478 aa12.74□□□□□ -0.37
LIG1-214ENST00000597146 CST1P01037 141 aa12.74□□□□□ -0.37
LIG1-214ENST00000597146 TUBG1P23258 451 aa12.74□□□□□ -0.37
LIG1-214ENST00000597146 EFNB2P52799 333 aa12.74□□□□□ -0.37
LIG1-214ENST00000597146 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.74□□□□□ -0.37
LIG1-214ENST00000597146 COX10Q12887 443 aa12.74□□□□□ -0.37
LIG1-214ENST00000597146 MICAQ29983 383 aa12.74□□□□□ -0.37
LIG1-214ENST00000597146 METTL11BQ5VVY1 283 aa12.74□□□□□ -0.37
LIG1-214ENST00000597146 DCDC5Q6ZRR9 648 aa12.74□□□□□ -0.37
LIG1-214ENST00000597146 NPEPL1Q8NDH3 523 aa12.74□□□□□ -0.37
LIG1-214ENST00000597146 OR9Q2Q8NGE9 314 aa12.74□□□□□ -0.37
LIG1-214ENST00000597146 PITX2Q99697 317 aa12.74□□□□□ -0.37
LIG1-214ENST00000597146 CHID1Q9BWS9 393 aa12.74□□□□□ -0.37
LIG1-214ENST00000597146 TSSK6Q9BXA6 273 aa12.74□□□□□ -0.37
LIG1-214ENST00000597146 PPA2Q9H2U2 334 aa12.74□□□□□ -0.37
LIG1-214ENST00000597146 TUBG2Q9NRH3 451 aa12.74□□□□□ -0.37
LIG1-214ENST00000597146 TBCCD1Q9NVR7 557 aa12.74□□□□□ -0.37
LIG1-214ENST00000597146 CDH10Q9Y6N8 788 aa12.74□□□□□ -0.37
LIG1-214ENST00000597146 TCRBV5S2A0A599 114 aa12.73□□□□□ -0.37
LIG1-214ENST00000597146 ANKRD61A6NGH8 418 aa12.73□□□□□ -0.37
LIG1-214ENST00000597146 IFNL4K9M1U5 179 aa12.73□□□□□ -0.37
LIG1-214ENST00000597146 RER1O15258 196 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms