RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 IL19Q9UHD0 177 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 DYSFO75923 2080 aa9.41□□□□□ -0.9
VRK3-210ENST00000596121 hCG_38984A0A1B0GV85 526 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 GGT3PA6NGU5 568 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 SLC22A31A6NKX4 558 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 XRCC2O43543 280 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 SRSF10O75494 262 aaKnown RBP9.4□□□□□ -0.9
VRK3-210ENST00000596121 PNPP00491 289 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 ANPEPP15144 967 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 MMP16P51512 607 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 RAD23AP54725 363 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 CXCR4P61073 352 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 SNRPGP62308 76 aaKnown RBP9.4□□□□□ -0.9
VRK3-210ENST00000596121 MFGE8Q08431 387 aaPredicted RBP9.4□□□□□ -0.9
VRK3-210ENST00000596121 HFEQ30201 348 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 SLC25A30Q5SVS4 291 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 LPCAT4Q643R3 524 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 ZNF322Q6U7Q0 402 aaPredicted RBP9.4□□□□□ -0.9
VRK3-210ENST00000596121 PLEKHG7Q6ZR37 379 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 KRT77Q7Z794 578 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.4□□□□□ -0.9
VRK3-210ENST00000596121 GID4Q8IVV7 300 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 OR8B12Q8NGG6 310 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 OR56B2PQ8NGI1 322 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 SPRYD4Q8WW59 207 aaPredicted RBP9.4□□□□□ -0.9
VRK3-210ENST00000596121 RNF166Q96A37 237 aaPredicted RBP9.4□□□□□ -0.9
VRK3-210ENST00000596121 TBX5Q99593 518 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 TMEM106BQ9NUM4 274 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 CLN6Q9NWW5 311 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 FAM206AQ9NX38 181 aa9.4□□□□□ -0.9
VRK3-210ENST00000596121 WARS2Q9UGM6 360 aaKnown RBP9.4□□□□□ -0.9
VRK3-210ENST00000596121 MRM2Q9UI43 246 aaKnown RBP9.4□□□□□ -0.9
VRK3-210ENST00000596121 TANC2Q9HCD6 1990 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 LOC100289279A0A1B0GTE1 492 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 A8MV72 311 aaPredicted RBP9.39□□□□□ -0.91
VRK3-210ENST00000596121 J3QRE1 110 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 ZNF205O95201 554 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 CYB5R3P00387 301 aaPredicted RBP9.39□□□□□ -0.91
VRK3-210ENST00000596121 IGHV2-70P01814 119 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 ACKR3P25106 362 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 GSK3AP49840 483 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 GZMKP49863 264 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 RIPPLY3P57055 190 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 PSMA6P60900 246 aaKnown RBP9.39□□□□□ -0.91
VRK3-210ENST00000596121 CDC42P60953 191 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 GABPB1Q06547 395 aaPredicted RBP9.39□□□□□ -0.91
VRK3-210ENST00000596121 RCN1Q15293 331 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 ZMYND11Q15326 602 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 MPPED2Q15777 294 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 LRRC36Q1X8D7 754 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 GFOD2Q3B7J2 385 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 FAM201AQ5SY85 155 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 ZNF684Q5T5D7 378 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 PRAMEF6Q5VXH4 476 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 DEGS2Q6QHC5 323 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 ZNF771Q7L3S4 317 aaPredicted RBP9.39□□□□□ -0.91
VRK3-210ENST00000596121 WDR86Q86TI4 376 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 MOGAT3Q86VF5 341 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 ENTHD1Q8IYW4 607 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 ZNF679Q8IYX0 411 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 OR52H1Q8NGJ2 320 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 TRUB1Q8WWH5 349 aaKnown RBP9.39□□□□□ -0.91
VRK3-210ENST00000596121 HPS1Q92902 700 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 STMN2Q93045 179 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 PGAM5Q96HS1 289 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 FGF23Q9GZV9 251 aaPredicted RBP9.39□□□□□ -0.91
VRK3-210ENST00000596121 OR10A2Q9H208 303 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 FAM118AQ9NWS6 357 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 PPP1R3CQ9UQK1 317 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 RHBDD3Q9Y3P4 386 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 ORC6Q9Y5N6 252 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 GMPPBQ9Y5P6 360 aa9.39□□□□□ -0.91
VRK3-210ENST00000596121 LOC100130705A0A1B0GUX0 176 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 A0A1W2PQL4 384 aaPredicted RBP9.38□□□□□ -0.91
VRK3-210ENST00000596121 CLDN25C9JDP6 229 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 TMEM178BH3BS89 294 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 CRLF1O75462 422 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 PTBP3O95758 552 aaKnown RBP9.38□□□□□ -0.91
VRK3-210ENST00000596121 TGFAP01135 160 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 IGLV3-1P01715 115 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 APOC1P02654 83 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 TNFSF4P23510 183 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 PEX2P28328 305 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 CD200P41217 278 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 SRP9P49458 86 aaKnown RBP9.38□□□□□ -0.91
VRK3-210ENST00000596121 CDH15P55291 814 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 ZNF85Q03923 595 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 OR8B8Q15620 311 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 OCLNQ16625 522 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 TIGD6Q17RP2 521 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 KCTD18Q6PI47 426 aaPredicted RBP9.38□□□□□ -0.91
VRK3-210ENST00000596121 C11orf53Q8IXP5 236 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 GALNT4Q8N4A0 578 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 RHOXF1Q8NHV9 184 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 APH1BQ8WW43 257 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 ASB17Q8WXJ9 295 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 MROQ9BYG7 248 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 PBOV1Q9GZY1 135 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 NIPAL2Q9H841 368 aa9.38□□□□□ -0.91
VRK3-210ENST00000596121 G6PC2Q9NQR9 355 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms