RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 XAF1Q6GPH4 301 aa19.29■□□□□ 0.68
SNRNP70-204ENST00000595231 PAMR1Q6UXH9 720 aa19.29■□□□□ 0.68
SNRNP70-204ENST00000595231 PGAP1Q75T13 922 aa19.29■□□□□ 0.68
SNRNP70-204ENST00000595231 LURAP1Q96LR2 239 aa19.29■□□□□ 0.68
SNRNP70-204ENST00000595231 SOX7Q9BT81 388 aa19.29■□□□□ 0.68
SNRNP70-204ENST00000595231 RGCCQ9H4X1 137 aa19.29■□□□□ 0.68
SNRNP70-204ENST00000595231 BABAM2Q9NXR7 383 aa19.29■□□□□ 0.68
SNRNP70-204ENST00000595231 ERGIC3Q9Y282 383 aa19.29■□□□□ 0.68
SNRNP70-204ENST00000595231 CD53P19397 219 aa19.28■□□□□ 0.68
SNRNP70-204ENST00000595231 KIR3DL2P43630 455 aa19.28■□□□□ 0.68
SNRNP70-204ENST00000595231 SELENOVP59797 346 aa19.28■□□□□ 0.68
SNRNP70-204ENST00000595231 FAM3AP98173 230 aa19.28■□□□□ 0.68
SNRNP70-204ENST00000595231 GFOD2Q3B7J2 385 aa19.28■□□□□ 0.68
SNRNP70-204ENST00000595231 OR2T2Q6IF00 324 aa19.28■□□□□ 0.68
SNRNP70-204ENST00000595231 KLBQ86Z14 1044 aa19.28■□□□□ 0.68
SNRNP70-204ENST00000595231 TAAR3PQ9P1P4 343 aa19.28■□□□□ 0.68
SNRNP70-204ENST00000595231 PURGQ9UJV8 347 aaKnown RBP19.28■□□□□ 0.68
SNRNP70-204ENST00000595231 PDZD2O15018 2839 aa19.28■□□□□ 0.68
SNRNP70-204ENST00000595231 TRIM64A6NGJ6 449 aa19.27■□□□□ 0.68
SNRNP70-204ENST00000595231 MMP15P51511 669 aa19.27■□□□□ 0.68
SNRNP70-204ENST00000595231 GBX2P52951 348 aaPredicted RBP19.27■□□□□ 0.68
SNRNP70-204ENST00000595231 MRPL28Q13084 256 aaKnown RBP19.27■□□□□ 0.68
SNRNP70-204ENST00000595231 TNK1Q13470 666 aa19.27■□□□□ 0.68
SNRNP70-204ENST00000595231 MRPL21Q7Z2W9 205 aaKnown RBP19.27■□□□□ 0.68
SNRNP70-204ENST00000595231 OR51E1Q8TCB6 317 aa19.27■□□□□ 0.68
SNRNP70-204ENST00000595231 CCDC90BQ9GZT6 254 aa19.27■□□□□ 0.68
SNRNP70-204ENST00000595231 ST6GALNAC2Q9UJ37 374 aa19.27■□□□□ 0.68
SNRNP70-204ENST00000595231 LSM2Q9Y333 95 aaKnown RBP19.27■□□□□ 0.68
SNRNP70-204ENST00000595231 CSMD1Q96PZ7 3565 aa19.27■□□□□ 0.68
SNRNP70-204ENST00000595231 hCG_38984A0A1B0GV85 526 aa19.27■□□□□ 0.67
SNRNP70-204ENST00000595231 OVOL3O00110 214 aa19.27■□□□□ 0.67
SNRNP70-204ENST00000595231 MYL12BO14950 172 aa19.27■□□□□ 0.67
SNRNP70-204ENST00000595231 TGM4P49221 684 aa19.27■□□□□ 0.67
SNRNP70-204ENST00000595231 CCR9P51686 369 aa19.27■□□□□ 0.67
SNRNP70-204ENST00000595231 WNT4P56705 351 aa19.27■□□□□ 0.67
SNRNP70-204ENST00000595231 ALKBH1Q13686 389 aaKnown RBP19.27■□□□□ 0.67
SNRNP70-204ENST00000595231 CCL19Q99731 98 aa19.27■□□□□ 0.67
SNRNP70-204ENST00000595231 OPA3Q9H6K4 179 aa19.27■□□□□ 0.67
SNRNP70-204ENST00000595231 ZNF391Q9UJN7 358 aa19.27■□□□□ 0.67
SNRNP70-204ENST00000595231 SIRT4Q9Y6E7 314 aaPredicted RBP19.27■□□□□ 0.67
SNRNP70-204ENST00000595231 A0A1B0GTI1 187 aa19.26■□□□□ 0.67
SNRNP70-204ENST00000595231 A0A1W2PPW3 197 aa19.26■□□□□ 0.67
SNRNP70-204ENST00000595231 LILRA1O75019 489 aa19.26■□□□□ 0.67
SNRNP70-204ENST00000595231 RAF1P04049 648 aa19.26■□□□□ 0.67
SNRNP70-204ENST00000595231 ALDH3B1P43353 468 aa19.26■□□□□ 0.67
SNRNP70-204ENST00000595231 CCDC58Q4VC31 144 aa19.26■□□□□ 0.67
SNRNP70-204ENST00000595231 HAVCR2Q8TDQ0 301 aa19.26■□□□□ 0.67
SNRNP70-204ENST00000595231 MND1Q9BWT6 205 aa19.26■□□□□ 0.67
SNRNP70-204ENST00000595231 GPR84Q9NQS5 396 aa19.26■□□□□ 0.67
SNRNP70-204ENST00000595231 PLEKHA6Q9Y2H5 1048 aa19.26■□□□□ 0.67
SNRNP70-204ENST00000595231 OR4C45A6NMZ5 311 aa19.25■□□□□ 0.67
SNRNP70-204ENST00000595231 CD300LBA8K4G0 201 aa19.25■□□□□ 0.67
SNRNP70-204ENST00000595231 IQCF6A8MYZ5 107 aa19.25■□□□□ 0.67
SNRNP70-204ENST00000595231 CFL1P23528 166 aaKnown RBP19.25■□□□□ 0.67
SNRNP70-204ENST00000595231 GSK3AP49840 483 aa19.25■□□□□ 0.67
SNRNP70-204ENST00000595231 CHN2P52757 468 aa19.25■□□□□ 0.67
SNRNP70-204ENST00000595231 CDH15P55291 814 aa19.25■□□□□ 0.67
SNRNP70-204ENST00000595231 SNRPD2P62316 118 aaKnown RBP19.25■□□□□ 0.67
SNRNP70-204ENST00000595231 ODF4Q2M2E3 257 aa19.25■□□□□ 0.67
SNRNP70-204ENST00000595231 PLPP7Q8NBV4 271 aa19.25■□□□□ 0.67
SNRNP70-204ENST00000595231 RPS4Y2Q8TD47 263 aa19.25■□□□□ 0.67
SNRNP70-204ENST00000595231 OR5M11Q96RB7 305 aa19.25■□□□□ 0.67
SNRNP70-204ENST00000595231 SETXQ7Z333 2677 aaKnown RBP19.25■□□□□ 0.67
SNRNP70-204ENST00000595231 P2RY10O00398 339 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 TIMM8AO60220 97 aaPredicted RBP19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 MRPS14O60783 128 aaKnown RBP19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 MAP2K4P45985 399 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 OR8B8Q15620 311 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 MOGQ16653 247 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 NKPD1Q17RQ9 610 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 KCTD21Q4G0X4 260 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 RPL22L1Q6P5R6 122 aaKnown RBP19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 Q6ZR03 302 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 RDH10Q8IZV5 341 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 OR5AS1Q8N127 324 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 ZCCHC24Q8N2G6 241 aaKnown RBP19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 BHLHE23Q8NDY6 225 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 GTF3AQ92664 365 aaKnown RBP19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 CACNG6Q9BXT2 260 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 USF3Q68DE3 2245 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 M0R233 179 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 OGG1O15527 345 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 ZFPL1O95159 310 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 NAT2P11245 290 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 SELEP16581 610 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 CCL1P22362 96 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 ACKR3P25106 362 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 CDKN1AP38936 164 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 SPHARQ15513 63 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 Q6ZSR3 168 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 OR8G5Q8NG78 346 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 PIGTQ969N2 578 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 TRIM36Q9NQ86 728 aa19.24■□□□□ 0.67
SNRNP70-204ENST00000595231 GGT3PA6NGU5 568 aa19.23■□□□□ 0.67
SNRNP70-204ENST00000595231 ISG15P05161 165 aa19.23■□□□□ 0.67
SNRNP70-204ENST00000595231 PPOXP50336 477 aa19.23■□□□□ 0.67
SNRNP70-204ENST00000595231 EMX1Q04741 257 aaPredicted RBP19.23■□□□□ 0.67
SNRNP70-204ENST00000595231 CDK5R1Q15078 307 aa19.23■□□□□ 0.67
SNRNP70-204ENST00000595231 SPARTQ8N0X7 666 aa19.23■□□□□ 0.67
SNRNP70-204ENST00000595231 OR56B2PQ8NGI1 322 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms