RNA–Protein interactions for RNA: ENST00000594047.2

SYNM-204, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 6,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-204ENST00000594047 SPRED1Q7Z699 444 aa16.43■□□□□ 0.22
SYNM-204ENST00000594047 MMP25Q9NPA2 562 aa16.43■□□□□ 0.22
SYNM-204ENST00000594047 TMEM268Q5VZI3 342 aa16.43■□□□□ 0.22
SYNM-204ENST00000594047 ARIH2OSQ8N7S6 290 aa16.43■□□□□ 0.22
SYNM-204ENST00000594047 APOBEC4Q8WW27 367 aaKnown RBP16.43■□□□□ 0.22
SYNM-204ENST00000594047 NKX2-1P43699 371 aaPredicted RBP16.43■□□□□ 0.22
SYNM-204ENST00000594047 SSPNQ14714 243 aa16.43■□□□□ 0.22
SYNM-204ENST00000594047 SMIM21Q3B7S5 101 aa16.43■□□□□ 0.22
SYNM-204ENST00000594047 NOXO1Q8NFA2 376 aa16.43■□□□□ 0.22
SYNM-204ENST00000594047 MED17Q9NVC6 651 aa16.43■□□□□ 0.22
SYNM-204ENST00000594047 A0A087WV62 115 aa16.43■□□□□ 0.22
SYNM-204ENST00000594047 GFRA3O60609 400 aa16.43■□□□□ 0.22
SYNM-204ENST00000594047 S100A4P26447 101 aaKnown RBP16.43■□□□□ 0.22
SYNM-204ENST00000594047 BSGP35613 385 aa16.43■□□□□ 0.22
SYNM-204ENST00000594047 OR2A2Q6IF42 318 aa16.43■□□□□ 0.22
SYNM-204ENST00000594047 TP53I13Q8NBR0 393 aaPredicted RBP16.43■□□□□ 0.22
SYNM-204ENST00000594047 SHROOM3Q8TF72 1996 aa16.43■□□□□ 0.22
SYNM-204ENST00000594047 M0R1X1 148 aa16.43■□□□□ 0.22
SYNM-204ENST00000594047 TERTO14746 1132 aaKnown RBP16.43■□□□□ 0.22
SYNM-204ENST00000594047 UBL3O95164 117 aa16.43■□□□□ 0.22
SYNM-204ENST00000594047 VAMP5O95183 116 aa16.43■□□□□ 0.22
SYNM-204ENST00000594047 SMIM17P0DL12 118 aa16.43■□□□□ 0.22
SYNM-204ENST00000594047 OR10D3Q8NH80 312 aa16.43■□□□□ 0.22
SYNM-204ENST00000594047 F5H697 171 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 TMPRSS2O15393 492 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 CD3EP07766 207 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 EPHA8P29322 1005 aaPredicted RBP16.42■□□□□ 0.22
SYNM-204ENST00000594047 KIRREL2Q6UWL6 708 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 DRAM2Q6UX65 266 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 OR2A1Q8NGT9 310 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 ISG20L2Q9H9L3 353 aaKnown RBP16.42■□□□□ 0.22
SYNM-204ENST00000594047 DOK5Q9P104 306 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 C7orf72A4D263 438 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 CRXO43186 299 aaPredicted RBP16.42■□□□□ 0.22
SYNM-204ENST00000594047 FAM122CQ6P4D5 195 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 NKAIN3Q8N8D7 197 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 CRISPLD2Q9H0B8 497 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 PLEKHB1Q9UF11 243 aaPredicted RBP16.42■□□□□ 0.22
SYNM-204ENST00000594047 IGHV1OR21-1A0A087WYE8 117 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 LRP5LA4QPB2 252 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 HLA-HP01893 362 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 OR5B3Q8NH48 314 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 CDC34P49427 236 aaPredicted RBP16.42■□□□□ 0.22
SYNM-204ENST00000594047 PCK2Q16822 640 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 ZNF767PQ75MW2 155 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 ERGIC1Q969X5 290 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 SOX7Q9BT81 388 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 PSORS1C1Q9UIG5 152 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 SCG5P05408 212 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 SLC35D3Q5M8T2 416 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 ZNF793Q6ZN11 406 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 LGI3Q8N145 548 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 ARHGEF39Q8N4T4 335 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 OR4F5Q8NH21 305 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 GALMQ96C23 342 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 OR4F4Q96R69 305 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 RAB1BQ9H0U4 201 aa16.42■□□□□ 0.22
SYNM-204ENST00000594047 FAM212BQ9NTI7 297 aaPredicted RBP16.42■□□□□ 0.22
SYNM-204ENST00000594047 TMEM215Q68D42 235 aa16.41■□□□□ 0.22
SYNM-204ENST00000594047 ZNF774Q6NX45 483 aa16.41■□□□□ 0.22
SYNM-204ENST00000594047 ZNF788Q6ZQV5 615 aa16.41■□□□□ 0.22
SYNM-204ENST00000594047 BLNKQ8WV28 456 aa16.41■□□□□ 0.22
SYNM-204ENST00000594047 LHX9Q9NQ69 397 aa16.41■□□□□ 0.22
SYNM-204ENST00000594047 TMEM108Q6UXF1 575 aa16.41■□□□□ 0.22
SYNM-204ENST00000594047 SLC38A9Q8NBW4 561 aa16.41■□□□□ 0.22
SYNM-204ENST00000594047 NDFIP1Q9BT67 221 aa16.41■□□□□ 0.22
SYNM-204ENST00000594047 ZNF230Q9UIE0 474 aaPredicted RBP16.41■□□□□ 0.22
SYNM-204ENST00000594047 DHHO43323 396 aa16.41■□□□□ 0.22
SYNM-204ENST00000594047 TAGLN2P37802 199 aaKnown RBP16.41■□□□□ 0.22
SYNM-204ENST00000594047 FAHD2BQ6P2I3 314 aaPredicted RBP16.41■□□□□ 0.22
SYNM-204ENST00000594047 TM4SF19Q96DZ7 209 aa16.41■□□□□ 0.22
SYNM-204ENST00000594047 FAHD2AQ96GK7 314 aa16.41■□□□□ 0.22
SYNM-204ENST00000594047 CNTRLQ7Z7A1 2325 aa16.41■□□□□ 0.22
SYNM-204ENST00000594047 ANKUB1A6NFN9 424 aa16.41■□□□□ 0.22
SYNM-204ENST00000594047 TNFRSF1AP19438 455 aa16.41■□□□□ 0.22
SYNM-204ENST00000594047 PLPP6Q8IY26 295 aa16.41■□□□□ 0.22
SYNM-204ENST00000594047 AMER3Q8N944 861 aa16.41■□□□□ 0.22
SYNM-204ENST00000594047 OR2A14Q96R47 310 aa16.41■□□□□ 0.22
SYNM-204ENST00000594047 ACHEP22303 614 aa16.41■□□□□ 0.22
SYNM-204ENST00000594047 RPS27AP62979 156 aaKnown RBP16.41■□□□□ 0.22
SYNM-204ENST00000594047 UBA52P62987 128 aaKnown RBP16.41■□□□□ 0.22
SYNM-204ENST00000594047 CADM4Q8NFZ8 388 aa16.41■□□□□ 0.22
SYNM-204ENST00000594047 OPRK1P41145 380 aa16.4■□□□□ 0.22
SYNM-204ENST00000594047 DUSP8Q13202 625 aa16.4■□□□□ 0.22
SYNM-204ENST00000594047 GDPGP1Q6ZNW5 385 aa16.4■□□□□ 0.22
SYNM-204ENST00000594047 ADPRHL1Q8NDY3 354 aa16.4■□□□□ 0.22
SYNM-204ENST00000594047 SLCO5A1Q9H2Y9 848 aa16.4■□□□□ 0.22
SYNM-204ENST00000594047 PCOLCE2Q9UKZ9 415 aa16.4■□□□□ 0.22
SYNM-204ENST00000594047 ANKRD36CQ5JPF3 1778 aa16.4■□□□□ 0.22
SYNM-204ENST00000594047 IGHV3OR15-7A0A075B7D8 119 aa16.4■□□□□ 0.22
SYNM-204ENST00000594047 PNLIPRP2P54317 469 aa16.4■□□□□ 0.22
SYNM-204ENST00000594047 ACSM6Q6P461 480 aa16.4■□□□□ 0.22
SYNM-204ENST00000594047 BHLHA15Q7RTS1 189 aaPredicted RBP16.4■□□□□ 0.22
SYNM-204ENST00000594047 NRARPQ7Z6K4 114 aa16.4■□□□□ 0.22
SYNM-204ENST00000594047 OR10R2Q8NGX6 335 aa16.4■□□□□ 0.22
SYNM-204ENST00000594047 S1PR5Q9H228 398 aa16.4■□□□□ 0.22
SYNM-204ENST00000594047 COA4Q9NYJ1 87 aa16.4■□□□□ 0.22
SYNM-204ENST00000594047 ICAM5Q9UMF0 924 aa16.4■□□□□ 0.22
SYNM-204ENST00000594047 KIR2DS1A0A191URI9 304 aa16.4■□□□□ 0.22
SYNM-204ENST00000594047 WNT1P04628 370 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms