RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 CDADC1Q9BWV3 514 aa12.28□□□□□ -0.44
PNKP-202ENST00000593706 NMNAT2Q9BZQ4 307 aa12.28□□□□□ -0.44
PNKP-202ENST00000593706 REEP1Q9H902 201 aa12.28□□□□□ -0.44
PNKP-202ENST00000593706 SRA1Q9HD15 236 aaKnown RBP12.28□□□□□ -0.44
PNKP-202ENST00000593706 DHRS12A0PJE2 317 aa12.27□□□□□ -0.45
PNKP-202ENST00000593706 SOX14O95416 240 aa12.27□□□□□ -0.45
PNKP-202ENST00000593706 FSTL3O95633 263 aa12.27□□□□□ -0.45
PNKP-202ENST00000593706 SRSF4Q08170 494 aaKnown RBP12.27□□□□□ -0.45
PNKP-202ENST00000593706 DNAL1Q4LDG9 190 aa12.27□□□□□ -0.45
PNKP-202ENST00000593706 WDR25Q64LD2 544 aaPredicted RBP12.27□□□□□ -0.45
PNKP-202ENST00000593706 TMEM179BQ7Z7N9 219 aa12.27□□□□□ -0.45
PNKP-202ENST00000593706 CYB561A3Q8NBI2 242 aa12.27□□□□□ -0.45
PNKP-202ENST00000593706 SLC37A3Q8NCC5 494 aa12.27□□□□□ -0.45
PNKP-202ENST00000593706 C19orf18Q8NEA5 215 aa12.27□□□□□ -0.45
PNKP-202ENST00000593706 NIPSNAP1Q9BPW8 284 aa12.27□□□□□ -0.45
PNKP-202ENST00000593706 CHIAQ9BZP6 476 aa12.27□□□□□ -0.45
PNKP-202ENST00000593706 NOX4Q9NPH5 578 aa12.27□□□□□ -0.45
PNKP-202ENST00000593706 ARMC1Q9NVT9 282 aa12.27□□□□□ -0.45
PNKP-202ENST00000593706 TET2Q6N021 2002 aaPredicted RBP12.27□□□□□ -0.45
PNKP-202ENST00000593706 TCRBV3S1A0A5B6 114 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 GYG2O15488 501 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 FAM20BO75063 409 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 PYCR1P32322 319 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 RAD23AP54725 363 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 BPIFB3P59826 476 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 MALLQ13021 153 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 PCK2Q16822 640 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 RUSC1-AS1Q66K80 236 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 LYPD4Q6UWN0 246 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 LYPD2Q6UXB3 125 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 LINC00346Q8IVM7 164 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 PAPD5Q8NDF8 572 aaKnown RBP12.26□□□□□ -0.45
PNKP-202ENST00000593706 OR10G2Q8NGC3 310 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 MAP6Q96JE9 813 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 LRGUKQ96M69 825 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 FEVQ99581 238 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 TSSK6Q9BXA6 273 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 UFSP2Q9NUQ7 469 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 TBC1D23Q9NUY8 699 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 KCNG2Q9UJ96 466 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 POMPQ9Y244 141 aa12.26□□□□□ -0.45
PNKP-202ENST00000593706 A0A1B0GWJ7 208 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 C22orf46C9J442 243 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 F5H5K5 113 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 M0QZ24 198 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 TOX4O94842 621 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 CST1P01037 141 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 SFTPBP07988 381 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 HOXB6P17509 224 aaKnown RBP12.25□□□□□ -0.45
PNKP-202ENST00000593706 ANOS1P23352 680 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 PMELP40967 661 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 GATA4P43694 442 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 NPY4RP50391 375 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 SLC25A1P53007 311 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 BNIP1Q12981 228 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 CRMP1Q14194 572 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 FLOT2Q14254 428 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 GK2Q14410 553 aaPredicted RBP12.25□□□□□ -0.45
PNKP-202ENST00000593706 KCNJ8Q15842 424 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 PRAMEF6Q5VXH4 476 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 CD276Q5ZPR3 534 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 OLFML2AQ68BL7 652 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 Q6YL49 198 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 PGAP1Q75T13 922 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 CELF2-AS1Q8N7Q2 184 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 BOLLQ8N9W6 283 aaKnown RBP12.25□□□□□ -0.45
PNKP-202ENST00000593706 OR2T33Q8NG76 320 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 OR2T4Q8NH00 348 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 SPRYD4Q8WW59 207 aaPredicted RBP12.25□□□□□ -0.45
PNKP-202ENST00000593706 ERGIC1Q969X5 290 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 SLCO4A1Q96BD0 722 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 FAM71F1Q96KD3 344 aaPredicted RBP12.25□□□□□ -0.45
PNKP-202ENST00000593706 PITX2Q99697 317 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 CADM1Q9BY67 442 aaKnown RBP12.25□□□□□ -0.45
PNKP-202ENST00000593706 PRDM13Q9H4Q3 707 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 PDP1Q9P0J1 537 aaPredicted RBP12.25□□□□□ -0.45
PNKP-202ENST00000593706 BAIAP2Q9UQB8 552 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 COMMD3-BMI1R4GMX3 469 aa12.25□□□□□ -0.45
PNKP-202ENST00000593706 ZNF879B4DU55 563 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 P2RY10O00398 339 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 DNAJC8O75937 253 aaPredicted RBP12.24□□□□□ -0.45
PNKP-202ENST00000593706 NDUFA7O95182 113 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 LCATP04180 440 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 MELTFP08582 738 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 ACSM4P0C7M7 580 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 OTX1P32242 354 aaPredicted RBP12.24□□□□□ -0.45
PNKP-202ENST00000593706 CFHR2P36980 270 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 CD200P41217 278 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 MAB21L1Q13394 359 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 PDCD1Q15116 288 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 OR8G1Q15617 311 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 SLC36A3Q495N2 470 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 LINC01590Q5TEZ4 76 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 MRPL21Q7Z2W9 205 aaKnown RBP12.24□□□□□ -0.45
PNKP-202ENST00000593706 TMEM86BQ8N661 226 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 OR9Q1Q8NGQ5 310 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 OR2AJ1Q8NGZ0 328 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 Q8TCH9 128 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 GIPC3Q8TF64 312 aa12.24□□□□□ -0.45
PNKP-202ENST00000593706 GATAD2BQ8WXI9 593 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms