RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 OR8B8Q15620 311 aa19.82■□□□□ 0.76
LSM4-202ENST00000593564 OCLNQ16625 522 aa19.82■□□□□ 0.76
LSM4-202ENST00000593564 PDLIM3Q53GG5 364 aaPredicted RBP19.82■□□□□ 0.76
LSM4-202ENST00000593564 RPL13AP3Q6NVV1 102 aa19.82■□□□□ 0.76
LSM4-202ENST00000593564 CYB561A3Q8NBI2 242 aa19.82■□□□□ 0.76
LSM4-202ENST00000593564 OR4C15Q8NGM1 316 aa19.82■□□□□ 0.76
LSM4-202ENST00000593564 GATAD2BQ8WXI9 593 aa19.82■□□□□ 0.76
LSM4-202ENST00000593564 NSMCE2Q96MF7 247 aa19.82■□□□□ 0.76
LSM4-202ENST00000593564 WDFY2Q96P53 400 aa19.82■□□□□ 0.76
LSM4-202ENST00000593564 ELAC2Q9BQ52 826 aaKnown RBP19.82■□□□□ 0.76
LSM4-202ENST00000593564 CHIAQ9BZP6 476 aa19.82■□□□□ 0.76
LSM4-202ENST00000593564 OPA3Q9H6K4 179 aa19.82■□□□□ 0.76
LSM4-202ENST00000593564 SMURF1Q9HCE7 757 aa19.82■□□□□ 0.76
LSM4-202ENST00000593564 C1orf123Q9NWV4 160 aa19.82■□□□□ 0.76
LSM4-202ENST00000593564 C1RLQ9NZP8 487 aa19.82■□□□□ 0.76
LSM4-202ENST00000593564 TVP23AA6NH52 213 aa19.81■□□□□ 0.76
LSM4-202ENST00000593564 ARPC2O15144 300 aa19.81■□□□□ 0.76
LSM4-202ENST00000593564 PSKH1P11801 424 aa19.81■□□□□ 0.76
LSM4-202ENST00000593564 RELBQ01201 579 aa19.81■□□□□ 0.76
LSM4-202ENST00000593564 MZT1Q08AG7 82 aa19.81■□□□□ 0.76
LSM4-202ENST00000593564 C11orf91Q3C1V1 193 aa19.81■□□□□ 0.76
LSM4-202ENST00000593564 METTL11BQ5VVY1 283 aa19.81■□□□□ 0.76
LSM4-202ENST00000593564 C17orf107Q6ZR85 190 aa19.81■□□□□ 0.76
LSM4-202ENST00000593564 DCXRQ7Z4W1 244 aa19.81■□□□□ 0.76
LSM4-202ENST00000593564 KIR3DL3Q8N743 410 aa19.81■□□□□ 0.76
LSM4-202ENST00000593564 OR56B2PQ8NGI1 322 aa19.81■□□□□ 0.76
LSM4-202ENST00000593564 ZNRF4Q8WWF5 429 aa19.81■□□□□ 0.76
LSM4-202ENST00000593564 COPS4Q9BT78 406 aa19.81■□□□□ 0.76
LSM4-202ENST00000593564 MED4Q9NPJ6 270 aa19.81■□□□□ 0.76
LSM4-202ENST00000593564 CD300AQ9UGN4 299 aa19.81■□□□□ 0.76
LSM4-202ENST00000593564 COMMD3-BMI1R4GMX3 469 aa19.81■□□□□ 0.76
LSM4-202ENST00000593564 RPL15P61313 204 aaKnown RBP19.8■□□□□ 0.76
LSM4-202ENST00000593564 PDCD1Q15116 288 aa19.8■□□□□ 0.76
LSM4-202ENST00000593564 SAMD4BQ5PRF9 694 aaKnown RBP19.8■□□□□ 0.76
LSM4-202ENST00000593564 OLFML2AQ68BL7 652 aa19.8■□□□□ 0.76
LSM4-202ENST00000593564 LYPD4Q6UWN0 246 aa19.8■□□□□ 0.76
LSM4-202ENST00000593564 GCSAMQ8N6F7 178 aa19.8■□□□□ 0.76
LSM4-202ENST00000593564 SSMEM1Q8WWF3 244 aa19.8■□□□□ 0.76
LSM4-202ENST00000593564 TRIM15Q9C019 465 aa19.8■□□□□ 0.76
LSM4-202ENST00000593564 SIRPDQ9H106 197 aa19.8■□□□□ 0.76
LSM4-202ENST00000593564 ACOXLQ9NUZ1 547 aa19.8■□□□□ 0.76
LSM4-202ENST00000593564 IL20Q9NYY1 176 aa19.8■□□□□ 0.76
LSM4-202ENST00000593564 TGP01266 2768 aa19.8■□□□□ 0.76
LSM4-202ENST00000593564 VWFP04275 2813 aa19.8■□□□□ 0.76
LSM4-202ENST00000593564 IGHV1-69DA0A0B4J2H0 117 aa19.79■□□□□ 0.76
LSM4-202ENST00000593564 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.79■□□□□ 0.76
LSM4-202ENST00000593564 A6NLC8 198 aa19.79■□□□□ 0.76
LSM4-202ENST00000593564 KRT36O76013 467 aa19.79■□□□□ 0.76
LSM4-202ENST00000593564 IGHV1-69P01742 117 aa19.79■□□□□ 0.76
LSM4-202ENST00000593564 GYPAP02724 150 aa19.79■□□□□ 0.76
LSM4-202ENST00000593564 GRPP07492 148 aa19.79■□□□□ 0.76
LSM4-202ENST00000593564 MSX2P35548 267 aaPredicted RBP19.79■□□□□ 0.76
LSM4-202ENST00000593564 HMGA2P52926 109 aa19.79■□□□□ 0.76
LSM4-202ENST00000593564 SRSF4Q08170 494 aaKnown RBP19.79■□□□□ 0.76
LSM4-202ENST00000593564 PCK2Q16822 640 aa19.79■□□□□ 0.76
LSM4-202ENST00000593564 ZNF826PQ6ZT77 177 aa19.79■□□□□ 0.76
LSM4-202ENST00000593564 FAM90A1Q86YD7 464 aa19.79■□□□□ 0.76
LSM4-202ENST00000593564 ZDHHC21Q8IVQ6 265 aa19.79■□□□□ 0.76
LSM4-202ENST00000593564 PGAM4Q8N0Y7 254 aa19.79■□□□□ 0.76
LSM4-202ENST00000593564 OR51L1Q8NGJ5 315 aa19.79■□□□□ 0.76
LSM4-202ENST00000593564 KCNJ15Q99712 375 aa19.79■□□□□ 0.76
LSM4-202ENST00000593564 RASSF4Q9H2L5 321 aa19.79■□□□□ 0.76
LSM4-202ENST00000593564 C14orf119Q9NWQ9 140 aa19.79■□□□□ 0.76
LSM4-202ENST00000593564 CLPSL1A2RUU4 121 aa19.78■□□□□ 0.76
LSM4-202ENST00000593564 FCN3O75636 299 aa19.78■□□□□ 0.76
LSM4-202ENST00000593564 ECDO95905 644 aaPredicted RBP19.78■□□□□ 0.76
LSM4-202ENST00000593564 LHBP01229 141 aa19.78■□□□□ 0.76
LSM4-202ENST00000593564 SPARCP09486 303 aa19.78■□□□□ 0.76
LSM4-202ENST00000593564 ENTPD1P49961 510 aa19.78■□□□□ 0.76
LSM4-202ENST00000593564 PRKXP51817 358 aa19.78■□□□□ 0.76
LSM4-202ENST00000593564 TEX36Q5VZQ5 186 aa19.78■□□□□ 0.76
LSM4-202ENST00000593564 SLC37A3Q8NCC5 494 aa19.78■□□□□ 0.76
LSM4-202ENST00000593564 OR9Q2Q8NGE9 314 aa19.78■□□□□ 0.76
LSM4-202ENST00000593564 OR8D4Q8NGM9 314 aa19.78■□□□□ 0.76
LSM4-202ENST00000593564 SPSB4Q96A44 273 aa19.78■□□□□ 0.76
LSM4-202ENST00000593564 SLAMF6Q96DU3 332 aa19.78■□□□□ 0.76
LSM4-202ENST00000593564 CITED1Q99966 193 aa19.78■□□□□ 0.76
LSM4-202ENST00000593564 BTBD10Q9BSF8 475 aa19.78■□□□□ 0.76
LSM4-202ENST00000593564 PDP1Q9P0J1 537 aaPredicted RBP19.78■□□□□ 0.76
LSM4-202ENST00000593564 KAAG1Q9UBP8 84 aa19.78■□□□□ 0.76
LSM4-202ENST00000593564 LYVE1Q9Y5Y7 322 aa19.78■□□□□ 0.76
LSM4-202ENST00000593564 WNK1Q9H4A3 2382 aa19.78■□□□□ 0.76
LSM4-202ENST00000593564 NOTCH1P46531 2555 aa19.77■□□□□ 0.76
LSM4-202ENST00000593564 hCG_1807616A0A1W2PRN6 198 aa19.77■□□□□ 0.76
LSM4-202ENST00000593564 XRCC2O43543 280 aa19.77■□□□□ 0.76
LSM4-202ENST00000593564 SLC2A1P11166 492 aa19.77■□□□□ 0.76
LSM4-202ENST00000593564 FMO3P31513 532 aa19.77■□□□□ 0.76
LSM4-202ENST00000593564 DDOSTP39656 456 aa19.77■□□□□ 0.76
LSM4-202ENST00000593564 TAF13Q15543 124 aa19.77■□□□□ 0.76
LSM4-202ENST00000593564 TEX30Q5JUR7 227 aa19.77■□□□□ 0.76
LSM4-202ENST00000593564 BTN2A1Q7KYR7 527 aa19.77■□□□□ 0.76
LSM4-202ENST00000593564 LNX2Q8N448 690 aa19.77■□□□□ 0.76
LSM4-202ENST00000593564 LINC00471Q8N535 108 aa19.77■□□□□ 0.76
LSM4-202ENST00000593564 OR9Q1Q8NGQ5 310 aa19.77■□□□□ 0.76
LSM4-202ENST00000593564 TBC1D15Q8TC07 691 aa19.77■□□□□ 0.76
LSM4-202ENST00000593564 DYRK2Q92630 601 aa19.77■□□□□ 0.76
LSM4-202ENST00000593564 LHX4Q969G2 390 aa19.77■□□□□ 0.76
LSM4-202ENST00000593564 CDRT15Q96T59 188 aa19.77■□□□□ 0.76
LSM4-202ENST00000593564 CENPMQ9NSP4 180 aa19.77■□□□□ 0.76
LSM4-202ENST00000593564 ZNF878C9JN71 531 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms