RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 TAF9Q16594 264 aa14.43□□□□□ -0.1
RETREG3-212ENST00000593251 FAM90A1Q86YD7 464 aa14.43□□□□□ -0.1
RETREG3-212ENST00000593251 GCSAMQ8N6F7 178 aa14.43□□□□□ -0.1
RETREG3-212ENST00000593251 DHRS1Q96LJ7 313 aa14.43□□□□□ -0.1
RETREG3-212ENST00000593251 SLC22A4Q9H015 551 aa14.43□□□□□ -0.1
RETREG3-212ENST00000593251 NSRP1Q9H0G5 558 aaKnown RBP14.43□□□□□ -0.1
RETREG3-212ENST00000593251 SEMA6AQ9H2E6 1030 aa14.43□□□□□ -0.1
RETREG3-212ENST00000593251 ADA2Q9NZK5 511 aa14.43□□□□□ -0.1
RETREG3-212ENST00000593251 A0A1B0GW55 424 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 hCG_1807616A0A1W2PRN6 198 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 ARPC3O15145 178 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 SASH3O75995 380 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 CLPXO76031 633 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 PTBP3O95758 552 aaKnown RBP14.42□□□□□ -0.1
RETREG3-212ENST00000593251 DUX4L2P0CJ85 424 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 DUX4L3P0CJ86 424 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 DUX4L4P0CJ87 422 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 DUX4L5P0CJ88 424 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 DUX4L6P0CJ89 424 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 DUX4L7P0CJ90 424 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 NOS3P29474 1203 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 PYCR1P32322 319 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 NUDT2P50583 147 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 PROK1P58294 105 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 RPL15P61313 204 aaKnown RBP14.42□□□□□ -0.1
RETREG3-212ENST00000593251 KRT72Q14CN4 511 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 GLYATL3Q5SZD4 288 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 SLC35F1Q5T1Q4 408 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 GLYATQ6IB77 296 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 DUX4L9Q6RFH8 374 aaPredicted RBP14.42□□□□□ -0.1
RETREG3-212ENST00000593251 LYPD4Q6UWN0 246 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 PIP4P2Q8N4L2 257 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 ST8SIA4Q92187 359 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 SPTSSAQ969W0 71 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 TCF7L1Q9HCS4 588 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 DUX4Q9UBX2 424 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 NOP16Q9Y3C1 178 aaKnown RBP14.42□□□□□ -0.1
RETREG3-212ENST00000593251 N6AMT1Q9Y5N5 214 aa14.42□□□□□ -0.1
RETREG3-212ENST00000593251 TET2Q6N021 2002 aaPredicted RBP14.42□□□□□ -0.1
RETREG3-212ENST00000593251 TVP23AA6NH52 213 aa14.41□□□□□ -0.1
RETREG3-212ENST00000593251 NDUFA2O43678 99 aa14.41□□□□□ -0.1
RETREG3-212ENST00000593251 PSKH1P11801 424 aa14.41□□□□□ -0.1
RETREG3-212ENST00000593251 SPIBQ01892 262 aa14.41□□□□□ -0.1
RETREG3-212ENST00000593251 PRB3Q04118 309 aaPredicted RBP14.41□□□□□ -0.1
RETREG3-212ENST00000593251 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.41□□□□□ -0.1
RETREG3-212ENST00000593251 Q6ZSV7 163 aa14.41□□□□□ -0.1
RETREG3-212ENST00000593251 VMO1Q7Z5L0 202 aa14.41□□□□□ -0.1
RETREG3-212ENST00000593251 LDLRAD3Q86YD5 345 aa14.41□□□□□ -0.1
RETREG3-212ENST00000593251 FAM110DQ8TAY7 271 aaPredicted RBP14.41□□□□□ -0.1
RETREG3-212ENST00000593251 ZNRF4Q8WWF5 429 aa14.41□□□□□ -0.1
RETREG3-212ENST00000593251 EFCAB1Q9HAE3 211 aa14.41□□□□□ -0.1
RETREG3-212ENST00000593251 TRIM36Q9NQ86 728 aa14.41□□□□□ -0.1
RETREG3-212ENST00000593251 DCAF13Q9NV06 445 aaKnown RBP14.41□□□□□ -0.1
RETREG3-212ENST00000593251 SLC22A31A6NKX4 558 aa14.4□□□□□ -0.1
RETREG3-212ENST00000593251 GADD45GO95257 159 aa14.4□□□□□ -0.1
RETREG3-212ENST00000593251 SLC2A1P11166 492 aa14.4□□□□□ -0.1
RETREG3-212ENST00000593251 ZNF823P16415 610 aa14.4□□□□□ -0.1
RETREG3-212ENST00000593251 PRKXP51817 358 aa14.4□□□□□ -0.1
RETREG3-212ENST00000593251 RNF148Q8N7C7 305 aa14.4□□□□□ -0.1
RETREG3-212ENST00000593251 CYB561A3Q8NBI2 242 aa14.4□□□□□ -0.1
RETREG3-212ENST00000593251 PLPP7Q8NBV4 271 aa14.4□□□□□ -0.1
RETREG3-212ENST00000593251 OR56B2PQ8NGI1 322 aa14.4□□□□□ -0.1
RETREG3-212ENST00000593251 ARGLU1Q9NWB6 273 aaPredicted RBP14.4□□□□□ -0.1
RETREG3-212ENST00000593251 MRPL15Q9P015 296 aaKnown RBP14.4□□□□□ -0.1
RETREG3-212ENST00000593251 ABCD2Q9UBJ2 740 aa14.4□□□□□ -0.1
RETREG3-212ENST00000593251 RPUSD1Q9UJJ7 312 aaKnown RBP14.4□□□□□ -0.1
RETREG3-212ENST00000593251 SAMD4AQ9UPU9 718 aaKnown RBP14.4□□□□□ -0.1
RETREG3-212ENST00000593251 DLX1P56177 255 aa14.39□□□□□ -0.11
RETREG3-212ENST00000593251 PSME3P61289 254 aa14.39□□□□□ -0.11
RETREG3-212ENST00000593251 HACD2Q6Y1H2 254 aa14.39□□□□□ -0.11
RETREG3-212ENST00000593251 ZSCAN4Q8NAM6 433 aaPredicted RBP14.39□□□□□ -0.11
RETREG3-212ENST00000593251 PROKR2Q8NFJ6 384 aa14.39□□□□□ -0.11
RETREG3-212ENST00000593251 OR51L1Q8NGJ5 315 aa14.39□□□□□ -0.11
RETREG3-212ENST00000593251 CCL13Q99616 98 aa14.39□□□□□ -0.11
RETREG3-212ENST00000593251 DPAGT1Q9H3H5 408 aa14.39□□□□□ -0.11
RETREG3-212ENST00000593251 CNTD2Q9H8S5 307 aa14.39□□□□□ -0.11
RETREG3-212ENST00000593251 SIRT7Q9NRC8 400 aa14.39□□□□□ -0.11
RETREG3-212ENST00000593251 ONECUT1Q9UBC0 465 aa14.39□□□□□ -0.11
RETREG3-212ENST00000593251 DNAJB11Q9UBS4 358 aa14.39□□□□□ -0.11
RETREG3-212ENST00000593251 FAM96BQ9Y3D0 163 aa14.39□□□□□ -0.11
RETREG3-212ENST00000593251 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.38□□□□□ -0.11
RETREG3-212ENST00000593251 A0A1W2PRD5 423 aa14.38□□□□□ -0.11
RETREG3-212ENST00000593251 A0A1W2PRF3 423 aa14.38□□□□□ -0.11
RETREG3-212ENST00000593251 A0A1W2PRM7 423 aa14.38□□□□□ -0.11
RETREG3-212ENST00000593251 BHLHE40O14503 412 aa14.38□□□□□ -0.11
RETREG3-212ENST00000593251 NDUFAB1O14561 156 aa14.38□□□□□ -0.11
RETREG3-212ENST00000593251 ECDO95905 644 aaPredicted RBP14.38□□□□□ -0.11
RETREG3-212ENST00000593251 LHBP01229 141 aa14.38□□□□□ -0.11
RETREG3-212ENST00000593251 H2AFXP16104 143 aaPredicted RBP14.38□□□□□ -0.11
RETREG3-212ENST00000593251 OTX1P32242 354 aaPredicted RBP14.38□□□□□ -0.11
RETREG3-212ENST00000593251 PCK2Q16822 640 aa14.38□□□□□ -0.11
RETREG3-212ENST00000593251 CDONQ4KMG0 1287 aa14.38□□□□□ -0.11
RETREG3-212ENST00000593251 TEX36Q5VZQ5 186 aa14.38□□□□□ -0.11
RETREG3-212ENST00000593251 DRAM2Q6UX65 266 aa14.38□□□□□ -0.11
RETREG3-212ENST00000593251 GDPGP1Q6ZNW5 385 aa14.38□□□□□ -0.11
RETREG3-212ENST00000593251 DCXRQ7Z4W1 244 aa14.38□□□□□ -0.11
RETREG3-212ENST00000593251 WDR86Q86TI4 376 aa14.38□□□□□ -0.11
RETREG3-212ENST00000593251 SPERTQ8NA61 448 aa14.38□□□□□ -0.11
RETREG3-212ENST00000593251 LRRC29Q8WV35 223 aa14.38□□□□□ -0.11
RETREG3-212ENST00000593251 SEH1LQ96EE3 360 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms