RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 MGAT4AQ9UM21 535 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 KLHDC2Q9Y2U9 406 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 ADGRA3Q8IWK6 1321 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 SIP14410 1827 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 CDK5RAP2Q96SN8 1893 aa3.86□□□□□ -1.79
SMAD4-216ENST00000593223 MYO10Q9HD67 2058 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 A0A1B0GTH9 108 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 SLC5A10A0PJK1 596 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 PSMB11A5LHX3 300 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 IGLON5A6NGN9 336 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 PP2D1A8MPX8 630 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 G3V3Y1 287 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 SH2D1BO14796 132 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 SLC31A1O15431 190 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 SGCEO43556 437 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 LYPLA2O95372 231 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 TNFAIP8O95379 198 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 IGHG3P01860 377 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 THRAP10827 490 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 PSMC3P17980 439 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 GPX3P22352 226 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 GLRA1P23415 457 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 SERPINB1P30740 379 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 ARR3P36575 388 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 CSRP3P50461 194 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 NTHL1P78549 312 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 VLDLRP98155 873 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 ST3GAL3Q11203 375 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 STX4Q12846 297 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 DYNC1I2Q13409 638 aaKnown RBP3.85□□□□□ -1.79
SMAD4-216ENST00000593223 KLF5Q13887 457 aaPredicted RBP3.85□□□□□ -1.79
SMAD4-216ENST00000593223 GCSAMLQ5JQS6 135 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 OGFRL1Q5TC84 451 aaPredicted RBP3.85□□□□□ -1.79
SMAD4-216ENST00000593223 SYPL2Q5VXT5 272 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 ADNP2Q6IQ32 1131 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 FAHD1Q6P587 224 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 DNM1P34Q6PK57 102 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 LRRC31Q6UY01 552 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 HACD2Q6Y1H2 254 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 AHSA2Q719I0 299 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 TMUB2Q71RG4 321 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 UNC93AQ86WB7 457 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 SLC35F2Q8IXU6 374 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 ZFP82Q8N141 532 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 CENPSQ8N2Z9 138 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 STPG2Q8N412 459 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 NOXO1Q8NFA2 376 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 OR2V1Q8NHB1 315 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 CXorf40AQ8TE69 158 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 PCNPQ8WW12 178 aaKnown RBP3.85□□□□□ -1.79
SMAD4-216ENST00000593223 PNPLA2Q96AD5 504 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 NABP1Q96AH0 204 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 SLC6A7Q99884 636 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 MRPS26Q9BYN8 205 aaKnown RBP3.85□□□□□ -1.79
SMAD4-216ENST00000593223 ING2Q9H160 280 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 NXF5Q9H1B4 397 aaKnown RBP3.85□□□□□ -1.79
SMAD4-216ENST00000593223 SLC25A51Q9H1U9 297 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 OR51B5Q9H339 312 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 GPN2Q9H9Y4 310 aaPredicted RBP3.85□□□□□ -1.79
SMAD4-216ENST00000593223 PLEKHA1Q9HB21 404 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 POPDC2Q9HBU9 364 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 SLC7A10Q9NS82 523 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 RHBDL2Q9NX52 303 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 THYN1Q9P016 225 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 OPN4Q9UHM6 478 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 GINS2Q9Y248 185 aa3.85□□□□□ -1.79
SMAD4-216ENST00000593223 MRPS18BQ9Y676 258 aaKnown RBP3.85□□□□□ -1.79
SMAD4-216ENST00000593223 NAV3Q8IVL0 2385 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 NSG1A0A0A6YYJ2 146 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 HIDE1A8MVS5 230 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 ZNF487B1APH4 448 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 K7EQG2 157 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 PLPP3O14495 311 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 NDUFA2O43678 99 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 FADS1O60427 444 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 UGT2B17O75795 530 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 MMP1P03956 469 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 MBL2P11226 248 aaPredicted RBP3.84□□□□□ -1.79
SMAD4-216ENST00000593223 FOLR2P14207 255 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 HLA-GP17693 338 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 FOXN2P32314 431 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 COILP38432 576 aaPredicted RBP3.84□□□□□ -1.79
SMAD4-216ENST00000593223 NSG1P42857 185 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 MAGEA12P43365 314 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 SLCO1A2P46721 670 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 PRLHRP49683 370 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 IDH3GP51553 393 aaPredicted RBP3.84□□□□□ -1.79
SMAD4-216ENST00000593223 UBE2KP61086 200 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 RPS27AP62979 156 aaKnown RBP3.84□□□□□ -1.79
SMAD4-216ENST00000593223 OC90Q02509 493 aaPredicted RBP3.84□□□□□ -1.79
SMAD4-216ENST00000593223 FASTKQ14296 549 aaKnown RBP3.84□□□□□ -1.79
SMAD4-216ENST00000593223 SMCO1Q147U7 214 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 PTGES3Q15185 160 aaKnown RBP3.84□□□□□ -1.79
SMAD4-216ENST00000593223 RPEL1Q2QD12 228 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 PDZD11Q5EBL8 140 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 SLC25A30Q5SVS4 291 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 C1orf220Q5T0J3 134 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 C9orf66Q5T8R8 295 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 HES5Q5TA89 166 aa3.84□□□□□ -1.79
SMAD4-216ENST00000593223 ZNF730Q6ZMV8 503 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms